[ome-users] LOCI + Nikon .JP2 files - red channel not registered

[Roger Leigh]

On 19/08/2013 17:05, Jonas Øgaard wrote:
> Hi,
>
> I'm experiencing some issues using the LOCI plugin with ImageJ. It seems
> the red channel, out of RGB, fails to load by using default values in
> LOCI importer. If, however, one selects Custom "Color Mode" - although
> keeping default values in the "Bio-Formats Custom Colorization" dialogue
> - the resulting image will be loaded correctly with all colors in their
> corresponding channels.
>
> I've uploaded a series of test files for your convenience with feedback
> ID 7571
> <http://qa.openmicroscopy.org.uk/qa/feedback/7571/?token=40fc1f3a93ccc13fb3fe446306dc7a5c>.

Many thanks for uploading the images.  I can certainly reproduce the
issue with them, and the current 4.4 release with ImageJ.  I have opened
a ticket for this, which is here:
https://trac.openmicroscopy.org.uk/ome/ticket/11387
You should get notified on any changes to the ticket.


Kind regards,
Roger Leigh

--
Dr Roger Leigh -- Open Microscopy Environment
Wellcome Trust Centre for Gene Regulation and Expression,
College of Life Sciences, University of Dundee, Dow Street,
Dundee DD1 5EH Scotland UK   Tel: (01382) 386364

The University of Dundee is a registered Scottish Charity, No: SC015096