[ome-users] bfconvert multi-series LSM file

Niko Ehrenfeuchter nikolaus.ehrenfeuchter at unibas.ch
Thu Sep 13 09:32:53 BST 2012


Dear OME people,

I'm trying to convert a multi-series xyzc LSM file to OME-TIFF. Using 
Bio-Formats via FiJi works for me by ticking the "Open all series" and 
"Concatenate series when compatible" boxes and finally exporting the 
data again.

So I tried to achieve the same using bfconvert, unfortunately I couldn't 
figure out how to specify the open-all-series and concatenate options. 
Is there a way to do this with bfconvert?

Thanks a lot!
Niko



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