[ome-users] Omero server web page not found
Mailly Philippe
philippe.mailly at snv.jussieu.fr
Fri Sep 7 17:18:19 BST 2012
Hi,
after updating the version 4.4.0 to 4.4.3 I no longer have access to the
web page of Omero server :
The requested URL /webclient/login/ was not found on this server.
However, the conexion via OMERO.client works perfectly.
I running omero web using apache2 on Ubuntu 12.04
I attached the log files of OMERO in debug mode and Apache.
================================================================================
OMERO Diagnostics 4.4.3-ice34-b5
================================================================================
Commands: java -version 1.6.0 (/usr/bin/java)
Commands: python -V 2.7.3 (/usr/bin/python)
Commands: icegridnode --version 3.4.2 (/usr/bin/icegridnode)
Commands: icegridadmin --version 3.4.2 (/usr/bin/icegridadmin)
Commands: psql --version 9.1.5 (/usr/bin/psql -- 2
others)
Server: icegridnode running
Server: Blitz-0 active (pid = 30277, enabled)
Server: DropBox inactive (disabled)
Server: FileServer active (pid = 30296, enabled)
Server: Indexer-0 active (pid = 30312, enabled)
Server: MonitorServer inactive (disabled)
Server: OMERO.Glacier2 active (pid = 30302, enabled)
Server: OMERO.IceStorm active (pid = 30305, enabled)
Server: PixelData-0 active (pid = 30303, enabled)
Server: Processor-0 active (pid = 30310, enabled)
Server: Tables-0 active (pid = 30299, enabled)
Server: TestDropBox inactive (enabled)
Log dir: /opt/OMERO/OMERO.server/var/log exists
Log files: Blitz-0.log 6.0 MB errors=3
warnings=58
Log files: DropBox.log 5.0 KB errors=14
warnings=0
Log files: FileServer.log 2.0 KB
Log files: Indexer-0.log 13.0 KB
Log files: MonitorServer.log 6.0 KB errors=7
warnings=0
Log files: OMEROweb.log 14.0 KB
Log files: OMEROweb_request.log 0.0 KB
Log files: PixelData-0.log 16.0 KB
Log files: Processor-0.log 11.0 KB errors=0
warnings=2
Log files: Tables-0.log 10.0 KB errors=0
warnings=1
Log files: TestDropBox.log n/a
Log files: master.err 4.0 KB
Log files: master.out 0.0 KB
Log files: Total size 6.83 MB
Parsing Blitz-0.log:[line:30] => Server restarted <=
Parsing Blitz-0.log:[line:600] => Server restarted <=
Parsing Blitz-0.log:[line:1219] => Server restarted <=
Parsing Blitz-0.log:[line:14181] => Server restarted <=
Parsing Blitz-0.log:[line:14838] => Server restarted <=
Parsing Blitz-0.log:[line:42172] => Server restarted <=
Parsing Blitz-0.log:[line:42333] => Server restarted <=
Environment:OMERO_HOME=/opt/OMERO/OMERO.server
Environment:OMERO_NODE=(unset)
Environment:OMERO_MASTER=(unset)
Environment:PATH=/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/lib/jvm/java-6-sun/bin:/usr/share/Ice-3.4.2:/usr/lib/postgresql/9.1/bin:/opt/OMERO/OMERO.server/bin:/opt/OMERO/OMERO.insight/
Environment:ICE_HOME=/usr/share/Ice-3.4.2
Environment:LD_LIBRARY_PATH=/usr/share/java:/usr/lib:
Environment:DYLD_LIBRARY_PATH=(unset)
OMERO data dir: '/users1/OMERO.data/' Exists? True Is writable? True
OMERO.web status... [RUNNING] (PID 30657)
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2012-09-07 17:54:42,280 INFO [ ome.services.blitz.Entry] ( main) Creating OMERO.blitz. Please wait...
2012-09-07 17:54:46,293 INFO [ng.ShutdownSafeEhcacheManagerFactoryBean] ( main) Initializing EHCache CacheManager
2012-09-07 17:54:50,297 INFO [ ome.services.fulltext.FullTextAnalyzer] ( main) Initialized FullTextAnalyzer
2012-09-07 17:54:58,087 INFO [ ome.services.util.DBPatchCheck] ( main) Verified database patch: OMERO4.4__0
2012-09-07 17:54:58,891 INFO [ ome.services.db.DatabaseIdentity] ( main) Using LSID format: urn:lsid:export.openmicroscopy.org:%s:d30759c2-b55c-4c8d-bbc0-8812850c4f07_%s%s
2012-09-07 17:55:01,293 INFO [ org.perf4j.TimingLogger] ( main) start[1347033299020] time[2273] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:01,672 INFO [ org.perf4j.TimingLogger] ( main) start[1347033301295] time[377] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:02,323 INFO [ org.perf4j.TimingLogger] ( main) start[1347033301673] time[650] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:02,950 INFO [ org.perf4j.TimingLogger] ( main) start[1347033302323] time[627] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:03,659 INFO [ org.perf4j.TimingLogger] ( main) start[1347033302964] time[695] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:04,213 INFO [ org.perf4j.TimingLogger] ( main) start[1347033303660] time[553] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:04,678 INFO [ org.perf4j.TimingLogger] ( main) start[1347033304214] time[464] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:04,965 INFO [ org.perf4j.TimingLogger] ( main) start[1347033304691] time[274] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:05,136 INFO [ org.perf4j.TimingLogger] ( main) start[1347033304965] time[171] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:05,237 INFO [ org.perf4j.TimingLogger] ( main) start[1347033305137] time[100] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:05,372 INFO [ org.perf4j.TimingLogger] ( main) start[1347033305238] time[134] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:05,477 INFO [ org.perf4j.TimingLogger] ( main) start[1347033305372] time[105] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:05,567 INFO [ org.perf4j.TimingLogger] ( main) start[1347033305477] time[90] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:05,656 INFO [ org.perf4j.TimingLogger] ( main) start[1347033305568] time[88] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:05,744 INFO [ org.perf4j.TimingLogger] ( main) start[1347033305657] time[87] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:05,837 INFO [ org.perf4j.TimingLogger] ( main) start[1347033305744] time[93] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:08,424 INFO [ org.perf4j.TimingLogger] ( main) start[1347033305837] time[2587] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:08,525 INFO [ org.perf4j.TimingLogger] ( main) start[1347033308425] time[100] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:08,642 INFO [ org.perf4j.TimingLogger] ( main) start[1347033308525] time[117] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:08,750 INFO [ org.perf4j.TimingLogger] ( main) start[1347033308643] time[107] tag[ome.io.nio.SimpleBackOff.256X256]
2012-09-07 17:55:08,769 INFO [ ome.io.nio.PixelsService] ( main) PixelsService(path=/users1/OMERO.data/, resolver=ome.services.OmeroFilePathResolver at 4e4b9101, backoff=ome.io.nio.SimpleBackOff(factor=350.8), sizes=ome.io.nio.ConfiguredTileSizes(w=256,h=256,W=3192,H=3192))
2012-09-07 17:55:09,569 INFO [ ome.services.fulltext.FullTextThread] ( main) Initializing Full-Text Indexer
2012-09-07 17:55:09,604 INFO [ ome.services.pixeldata.PixelDataThread] ( main) Initializing PixelDataThread (create events only)
2012-09-07 17:55:10,606 INFO [ ome.services.util.ServerVersionCheck] ( main) -------------------------------------------------
2012-09-07 17:55:10,607 INFO [ ome.services.util.ServerVersionCheck] ( main) OMERO Version: 4.4.3-ice34-b5 Ready.
2012-09-07 17:55:10,607 INFO [ ome.services.util.ServerVersionCheck] ( main) -------------------------------------------------
2012-09-07 17:55:10,905 INFO [ ome.system.UpgradeCheck] ( main) no update needed
2012-09-07 17:55:10,913 INFO [ ome.tools.hibernate.ExtendedMetadata] ( main) Calculating ExtendedMetadata...
2012-09-07 17:55:11,334 INFO [.services.scheduler.SchedulerFactoryBean] ( main) Starting Quartz Scheduler now
2012-09-07 17:55:11,382 INFO [ ome.services.util.ServiceHandler] ( main) Executor.doWork -- ome.services.util.NamespaceCheck.namespaceCheck
2012-09-07 17:55:11,382 INFO [ ome.services.util.ServiceHandler] ( main) Args: [null, InternalSF at 1289491293]
2012-09-07 17:55:12,179 INFO [ ome.security.basic.EventHandler] ( main) Auth: user=0,group=0,event=3451(Internal),sess=756f05fa-6faa-47f9-8460-3ac68ebd14f9
2012-09-07 17:55:12,888 INFO [ org.perf4j.TimingLogger] ( main) start[1347033311382] time[1506] tag[omero.call.success.ome.services.util.NamespaceCheck$1.doWork]
2012-09-07 17:55:12,888 INFO [ ome.services.util.ServiceHandler] ( main) Rslt: null
2012-09-07 17:55:16,915 INFO [e.services.blitz.util.BlitzConfiguration] ( main) Initializing Ice.Communicator
2012-09-07 17:55:17,177 INFO [ ome.services.blitz.fire.Ring] ( main) Checking cluster
2012-09-07 17:55:17,243 INFO [ ome.services.blitz.fire.Registry] ( main) Found 0 cluster node(s) : []
2012-09-07 17:55:17,244 INFO [ ome.services.blitz.fire.Ring] ( main) Got 0 cluster uuids : []
2012-09-07 17:55:17,268 INFO [ ome.services.util.ServiceHandler] ( main) Executor.doWork -- ome.services.blitz.fire.Ring.getManagerList
2012-09-07 17:55:17,269 INFO [ ome.services.util.ServiceHandler] ( main) Args: [null, InternalSF at 1289491293]
2012-09-07 17:55:17,302 INFO [ ome.security.basic.EventHandler] ( main) Auth: user=0,group=0,event=null(Internal),sess=756f05fa-6faa-47f9-8460-3ac68ebd14f9
2012-09-07 17:55:17,414 INFO [ org.perf4j.TimingLogger] ( main) start[1347033317269] time[145] tag[omero.call.success.ome.services.blitz.fire.Ring$2.doWork]
2012-09-07 17:55:17,415 INFO [ ome.services.util.ServiceHandler] ( main) Rslt: (228ecbec-e143-4162-8570-13c316a7f3e9)
2012-09-07 17:55:17,416 INFO [ ome.services.blitz.fire.Ring] ( main) Purging node: 228ecbec-e143-4162-8570-13c316a7f3e9
2012-09-07 17:55:17,592 INFO [ ome.services.util.ServiceHandler] ( main) Executor.doWork -- ome.services.blitz.fire.Ring.executeUpdate - set closed = now()
2012-09-07 17:55:17,593 INFO [ ome.services.util.ServiceHandler] ( main) Args: [null, InternalSF at 1289491293]
2012-09-07 17:55:17,688 INFO [ ome.security.basic.EventHandler] ( main) Auth: user=0,group=0,event=3452(Internal),sess=756f05fa-6faa-47f9-8460-3ac68ebd14f9
2012-09-07 17:55:17,718 INFO [ org.perf4j.TimingLogger] ( main) start[1347033317593] time[125] tag[omero.call.success.ome.services.blitz.fire.Ring$3.doWork]
2012-09-07 17:55:17,719 INFO [ ome.services.util.ServiceHandler] ( main) Rslt: 0
2012-09-07 17:55:17,719 INFO [ ome.services.blitz.fire.Ring] ( main) Removed 0 entries with value 228ecbec-e143-4162-8570-13c316a7f3e9
2012-09-07 17:55:17,720 INFO [ ome.services.util.ServiceHandler] ( main) Executor.doWork -- ome.services.blitz.fire.Ring.setManagerDown
2012-09-07 17:55:17,721 INFO [ ome.services.util.ServiceHandler] ( main) Args: [null, InternalSF at 1289491293]
2012-09-07 17:55:17,764 INFO [ ome.security.basic.EventHandler] ( main) Auth: user=0,group=0,event=3453(Internal),sess=756f05fa-6faa-47f9-8460-3ac68ebd14f9
2012-09-07 17:55:17,776 INFO [ org.perf4j.TimingLogger] ( main) start[1347033317721] time[55] tag[omero.call.success.ome.services.blitz.fire.Ring$4.doWork]
2012-09-07 17:55:17,777 INFO [ ome.services.util.ServiceHandler] ( main) Rslt: 1
2012-09-07 17:55:17,777 INFO [ ome.services.blitz.fire.Ring] ( main) Removed manager: 228ecbec-e143-4162-8570-13c316a7f3e9
2012-09-07 17:55:17,777 INFO [ ome.services.blitz.fire.Ring] ( main) handleRingShutdown: 228ecbec-e143-4162-8570-13c316a7f3e9
2012-09-07 17:55:17,780 INFO [ ome.services.util.ServiceHandler] ( main) Executor.doWork -- ome.services.blitz.fire.Ring.addManager
2012-09-07 17:55:17,780 INFO [ ome.services.util.ServiceHandler] ( main) Args: [null, InternalSF at 1289491293]
2012-09-07 17:55:17,895 INFO [ ome.security.basic.EventHandler] ( main) Auth: user=0,group=0,event=3454(Internal),sess=756f05fa-6faa-47f9-8460-3ac68ebd14f9
2012-09-07 17:55:17,903 INFO [ ome.security.basic.CurrentDetails] ( main) Adding log:INSERT,class ome.model.meta.Node,1251
2012-09-07 17:55:17,956 INFO [ org.perf4j.TimingLogger] ( main) start[1347033317780] time[176] tag[omero.call.success.ome.services.blitz.fire.Ring$5.doWork]
2012-09-07 17:55:17,957 INFO [ ome.services.util.ServiceHandler] ( main) Rslt: ome.model.meta.Node:Id_1251
2012-09-07 17:55:17,989 INFO [ ome.services.blitz.fire.Registry] ( main) Added ClusterNode/756f05fa-6faa-47f9-8460-3ac68ebd14f9 to registry
2012-09-07 17:55:18,850 INFO [.services.blitz.repo.AbstractRepositoryI] ( main) Initializing repository in /users1/OMERO.data/
2012-09-07 17:55:18,963 INFO [ ome.services.util.ServiceHandler] ( main) Executor.doWork -- ome.services.scripts.ScriptRepoHelper.loadAll(true)
2012-09-07 17:55:18,964 INFO [ ome.services.util.ServiceHandler] ( main) Args: [null, InternalSF at 1289491293]
2012-09-07 17:55:18,992 INFO [ ome.security.basic.EventHandler] ( main) Auth: user=0,group=0,event=3455(Internal),sess=756f05fa-6faa-47f9-8460-3ac68ebd14f9
2012-09-07 17:55:19,183 INFO [ org.perf4j.TimingLogger] ( main) start[1347033318964] time[219] tag[omero.call.success.ome.services.scripts.ScriptRepoHelper$5.doWork]
2012-09-07 17:55:19,183 INFO [ ome.services.util.ServiceHandler] ( main) Rslt: (ome.model.core.OriginalFile:Id_1, ome.model.core.OriginalFile:Id_301, ome.model.core.OriginalFile:Id_302, ... 10 more)
2012-09-07 17:55:19,185 INFO [.services.blitz.repo.AbstractRepositoryI] ( main) Initializing repository in /opt/OMERO/OMERO.server-4.4.3-ice34-b5/./lib/scripts
2012-09-07 17:55:19,353 INFO [ ome.services.util.ServiceHandler] (2-thread-2) Executor.doWork -- ome.services.blitz.repo.LegacyRepositoryI.takeover
2012-09-07 17:55:19,353 INFO [ ome.services.util.ServiceHandler] (2-thread-2) Args: [null, InternalSF at 1289491293]
2012-09-07 17:55:19,352 INFO [ ome.services.util.ServiceHandler] (2-thread-3) Executor.doWork -- ome.services.blitz.repo.ScriptRepositoryI.takeover
2012-09-07 17:55:19,360 INFO [ ome.services.util.ServiceHandler] (2-thread-3) Args: [null, InternalSF at 1289491293]
2012-09-07 17:55:19,408 INFO [ ome.security.basic.EventHandler] (2-thread-2) Auth: user=0,group=0,event=3456(Internal),sess=756f05fa-6faa-47f9-8460-3ac68ebd14f9
2012-09-07 17:55:19,475 INFO [ ome.security.basic.EventHandler] (2-thread-3) Auth: user=0,group=0,event=3457(Internal),sess=756f05fa-6faa-47f9-8460-3ac68ebd14f9
2012-09-07 17:55:19,492 INFO [.services.blitz.repo.AbstractRepositoryI] (2-thread-2) Opened repository OMERO.data (uuid=4dd640e1-ceea-45fc-963b-f9747fa02f8e)
2012-09-07 17:55:19,503 INFO [.services.blitz.repo.AbstractRepositoryI] (2-thread-3) Opened repository scripts (uuid=ScriptRepo)
2012-09-07 17:55:19,539 INFO [ ome.services.blitz.util.CheckAllJobs] ( Thread-8) Waiting 120 secs. for callbacks
2012-09-07 17:55:19,541 INFO [ ome.services.blitz.Entry] ( main) OMERO.blitz now accepting connections.
2012-09-07 17:55:19,567 INFO [ ome.services.blitz.fire.Registry] (2-thread-3) Updated InternalRepository-ScriptRepo in registry
2012-09-07 17:55:19,575 INFO [ ome.services.blitz.fire.Registry] (2-thread-2) Updated InternalRepository-4dd640e1-ceea-45fc-963b-f9747fa02f8e in registry
2012-09-07 17:55:19,584 INFO [ ome.services.blitz.fire.Registry] (2-thread-2) Updated PublicRepository-4dd640e1-ceea-45fc-963b-f9747fa02f8e in registry
2012-09-07 17:55:19,592 INFO [ ome.services.blitz.fire.Registry] (2-thread-3) Updated PublicRepository-ScriptRepo in registry
2012-09-07 17:55:19,654 INFO [.services.blitz.repo.AbstractRepositoryI] (2-thread-3) Repository now active
2012-09-07 17:55:19,654 INFO [.services.blitz.repo.AbstractRepositoryI] (2-thread-2) Repository now active
2012-09-07 17:55:19,673 INFO [ org.perf4j.TimingLogger] (2-thread-2) start[1347033319353] time[320] tag[omero.call.success.ome.services.blitz.repo.AbstractRepositoryI$GetOrCreateRepo.doWork]
2012-09-07 17:55:19,674 INFO [ ome.services.util.ServiceHandler] (2-thread-2) Rslt: ome.model.core.OriginalFile:Id_15
2012-09-07 17:55:19,676 INFO [ ome.services.util.ServiceHandler] (2-thread-2) Executor.doWork -- ome.services.blitz.repo.LegacyRepositoryI.getDescription(15)
2012-09-07 17:55:19,676 INFO [ ome.services.util.ServiceHandler] (2-thread-2) Args: [null, InternalSF at 1289491293]
2012-09-07 17:55:19,681 INFO [ org.perf4j.TimingLogger] (2-thread-3) start[1347033319360] time[321] tag[omero.call.success.ome.services.blitz.repo.AbstractRepositoryI$GetOrCreateRepo.doWork]
2012-09-07 17:55:19,681 INFO [ ome.services.util.ServiceHandler] (2-thread-3) Rslt: ome.model.core.OriginalFile:Id_14
2012-09-07 17:55:19,682 INFO [ ome.services.util.ServiceHandler] (2-thread-3) Executor.doWork -- ome.services.blitz.repo.ScriptRepositoryI.getDescription(14)
2012-09-07 17:55:19,682 INFO [ ome.services.util.ServiceHandler] (2-thread-3) Args: [null, InternalSF at 1289491293]
2012-09-07 17:55:19,686 INFO [ ome.security.basic.EventHandler] (2-thread-2) Auth: user=0,group=0,event=null(Internal),sess=756f05fa-6faa-47f9-8460-3ac68ebd14f9
2012-09-07 17:55:19,686 INFO [ ome.security.basic.EventHandler] (2-thread-3) Auth: user=0,group=0,event=null(Internal),sess=756f05fa-6faa-47f9-8460-3ac68ebd14f9
2012-09-07 17:55:19,729 INFO [ org.perf4j.TimingLogger] (2-thread-3) start[1347033319682] time[47] tag[omero.call.success.ome.services.blitz.repo.AbstractRepositoryI$1.doWork]
2012-09-07 17:55:19,729 INFO [ ome.services.util.ServiceHandler] (2-thread-3) Rslt: ome.model.core.OriginalFile:Id_14
2012-09-07 17:55:19,741 INFO [ org.perf4j.TimingLogger] (2-thread-2) start[1347033319676] time[65] tag[omero.call.success.ome.services.blitz.repo.AbstractRepositoryI$1.doWork]
2012-09-07 17:55:19,741 INFO [ ome.services.util.ServiceHandler] (2-thread-2) Rslt: ome.model.core.OriginalFile:Id_15
2012-09-07 17:55:27,242 INFO [ ome.services.util.ServiceHandler] (l.Server-6) Executor.doWork -- ome.services.sessions.SessionManagerImpl.createSession
2012-09-07 17:55:27,242 INFO [ ome.services.util.ServiceHandler] (l.Server-7) Executor.doWork -- ome.services.sessions.SessionManagerImpl.createSession
2012-09-07 17:55:27,242 INFO [ ome.services.util.ServiceHandler] (l.Server-6) Args: [null, InternalSF at 1289491293]
2012-09-07 17:55:27,243 INFO [ ome.services.util.ServiceHandler] (l.Server-7) Args: [null, InternalSF at 1289491293]
2012-09-07 17:55:27,287 INFO [ ome.security.basic.EventHandler] (l.Server-6) Auth: user=0,group=0,event=3458(Sessions),sess=756f05fa-6faa-47f9-8460-3ac68ebd14f9
2012-09-07 17:55:27,295 INFO [ ome.security.basic.EventHandler] (l.Server-7) Auth: user=0,group=0,event=3459(Sessions),sess=756f05fa-6faa-47f9-8460-3ac68ebd14f9
2012-09-07 17:55:27,356 INFO [ ome.security.basic.CurrentDetails] (l.Server-6) Adding log:INSERT,class ome.model.meta.Session,4033
2012-09-07 17:55:27,358 INFO [ ome.security.basic.CurrentDetails] (l.Server-7) Adding log:INSERT,class ome.model.meta.Session,4034
2012-09-07 17:55:27,433 INFO [ org.perf4j.TimingLogger] (l.Server-6) start[1347033327243] time[190] tag[omero.call.success.ome.services.sessions.SessionManagerImpl$2.doWork]
2012-09-07 17:55:27,433 INFO [ ome.services.util.ServiceHandler] (l.Server-6) Rslt: (ome.model.meta.Experimenter:Id_0, ome.model.meta.ExperimenterGroup:Id_0, (0, 1), ... 4 more)
2012-09-07 17:55:27,440 INFO [ org.perf4j.TimingLogger] (l.Server-7) start[1347033327243] time[197] tag[omero.call.success.ome.services.sessions.SessionManagerImpl$2.doWork]
2012-09-07 17:55:27,441 INFO [ ome.services.util.ServiceHandler] (l.Server-7) Rslt: (ome.model.meta.Experimenter:Id_0, ome.model.meta.ExperimenterGroup:Id_0, (0, 1), ... 4 more)
2012-09-07 17:55:27,461 INFO [ ome.services.blitz.fire.SessionManagerI] (l.Server-6) Created session ServiceFactoryI(session-7bbb6b45-ab7a-4c99-bd99-896b400f509b/6e25ea27-272f-4385-8952-ef1fce4eee45) for user root (agent=Python service)
2012-09-07 17:55:27,461 INFO [ ome.services.blitz.fire.SessionManagerI] (l.Server-7) Created session ServiceFactoryI(session-66f2da64-f200-4216-ad6e-11a660ff3739/f47eca22-dc64-4c71-b618-873d3d42d6b7) for user root (agent=Python service)
2012-09-07 17:55:27,469 INFO [ ome.services.blitz.util.CheckAllJobs] (l.Server-0) Received 0 job(s)
2012-09-07 17:55:27,507 INFO [ omero.cmd.SessionI] (l.Server-9) Added servant to adapter: f47eca22-dc64-4c71-b618-873d3d42d6b7/66f2da64-f200-4216-ad6e-11a660ff3739omero.api.IConfig(omero.api._IConfigTie at 33a81a38)
2012-09-07 17:55:27,512 INFO [ omero.cmd.SessionI] (l.Server-1) Added servant to adapter: 6e25ea27-272f-4385-8952-ef1fce4eee45/7bbb6b45-ab7a-4c99-bd99-896b400f509bomero.grid.SharedResources(omero.grid._SharedResourcesTie at 39bfea7f)
2012-09-07 17:55:27,545 INFO [ ome.services.util.ServiceHandler] (l.Server-7) Meth: interface ome.api.IConfig.getConfigValue
2012-09-07 17:55:27,546 INFO [ ome.services.util.ServiceHandler] (l.Server-7) Args: [omero.data.dir]
2012-09-07 17:55:27,570 INFO [ ome.security.basic.EventHandler] (l.Server-7) Auth: user=0,group=0,event=3460(User),sess=f47eca22-dc64-4c71-b618-873d3d42d6b7
2012-09-07 17:55:27,590 INFO [ org.perf4j.TimingLogger] (l.Server-7) start[1347033327546] time[44] tag[omero.call.success.ome.logic.ConfigImpl.getConfigValue]
2012-09-07 17:55:27,590 INFO [ ome.services.util.ServiceHandler] (l.Server-7) Rslt: /users1/OMERO.data/
2012-09-07 17:55:27,593 INFO [ ome.services.util.ServiceHandler] (l.Server-5) Meth: interface ome.api.IConfig.getDatabaseUuid
2012-09-07 17:55:27,594 INFO [ ome.services.util.ServiceHandler] (l.Server-5) Args: ()
2012-09-07 17:55:27,615 INFO [ ome.security.basic.EventHandler] (l.Server-5) Auth: user=0,group=0,event=3461(User),sess=f47eca22-dc64-4c71-b618-873d3d42d6b7
2012-09-07 17:55:27,623 INFO [ org.perf4j.TimingLogger] (l.Server-5) start[1347033327594] time[29] tag[omero.call.success.ome.logic.ConfigImpl.getDatabaseUuid]
2012-09-07 17:55:27,623 INFO [ ome.services.util.ServiceHandler] (l.Server-5) Rslt: d30759c2-b55c-4c8d-bbc0-8812850c4f07
2012-09-07 17:55:27,693 INFO [ omero.cmd.SessionI] (l.Server-3) Added servant to adapter: f47eca22-dc64-4c71-b618-873d3d42d6b7/66f2da64-f200-4216-ad6e-11a660ff3739omero.api.IQuery(omero.api._IQueryTie at 53c8547b)
2012-09-07 17:55:27,727 INFO [ ome.services.util.ServiceHandler] (l.Server-0) Meth: interface ome.api.IQuery.findByQuery
2012-09-07 17:55:27,727 INFO [ ome.services.util.ServiceHandler] (l.Server-0) Args: [select f from OriginalFile f where sha1 = :uuid, PARAMS:uuid=4dd640e1-ceea-45fc-963b-f9747fa02f8e ]
2012-09-07 17:55:27,732 INFO [ ome.security.basic.EventHandler] (l.Server-0) Auth: user=0,group=0,event=null(User),sess=f47eca22-dc64-4c71-b618-873d3d42d6b7
2012-09-07 17:55:27,745 INFO [ org.perf4j.TimingLogger] (l.Server-0) start[1347033327727] time[18] tag[omero.call.success.ome.logic.QueryImpl.findByQuery]
2012-09-07 17:55:27,745 INFO [ ome.services.util.ServiceHandler] (l.Server-0) Rslt: ome.model.core.OriginalFile:Id_15
-------------- next part --------------
2012-09-07 17:54:41,005 INFO [ fsserver.FileServer] (MainThread) Started OMERO.fs FileServer
-------------- next part --------------
2012-09-07 17:55:25,442 INFO [ __main__] (MainThread) Application Starting...
2012-09-07 17:55:25,451 DEBUG [ omeroweb.settings] (MainThread) ADMINS = [] (source:default)
2012-09-07 17:55:25,451 DEBUG [ omeroweb.settings] (MainThread) APPLICATION_SERVER = 'fastcgi-tcp' (source:omero.web.application_server)
2012-09-07 17:55:25,452 DEBUG [ omeroweb.settings] (MainThread) APPLICATION_SERVER_HOST = '0.0.0.0' (source:default)
2012-09-07 17:55:25,452 DEBUG [ omeroweb.settings] (MainThread) APPLICATION_SERVER_PORT = '4080' (source:default)
2012-09-07 17:55:25,452 DEBUG [ omeroweb.settings] (MainThread) ADDITIONAL_APPS = [] (source:default)
2012-09-07 17:55:25,452 DEBUG [ omeroweb.settings] (MainThread) CACHES = {} (source:default)
2012-09-07 17:55:25,452 DEBUG [ omeroweb.settings] (MainThread) DATABASES = {} (source:default)
2012-09-07 17:55:25,452 DEBUG [ omeroweb.settings] (MainThread) DEBUG = True (source:omero.web.debug)
2012-09-07 17:55:25,452 DEBUG [ omeroweb.settings] (MainThread) EMAIL_HOST = None (source:default)
2012-09-07 17:55:25,452 DEBUG [ omeroweb.settings] (MainThread) EMAIL_HOST_PASSWORD = '********************' (source:default)
2012-09-07 17:55:25,453 DEBUG [ omeroweb.settings] (MainThread) EMAIL_HOST_USER = None (source:default)
2012-09-07 17:55:25,453 DEBUG [ omeroweb.settings] (MainThread) EMAIL_PORT = None (source:default)
2012-09-07 17:55:25,453 DEBUG [ omeroweb.settings] (MainThread) EMAIL_SUBJECT_PREFIX = '[OMERO.web] ' (source:default)
2012-09-07 17:55:25,453 DEBUG [ omeroweb.settings] (MainThread) EMAIL_USE_TLS = False (source:default)
2012-09-07 17:55:25,453 DEBUG [ omeroweb.settings] (MainThread) INDEX_TEMPLATE = None (source:default)
2012-09-07 17:55:25,453 DEBUG [ omeroweb.settings] (MainThread) LOGDIR = '/opt/OMERO/OMERO.server/var/log' (source:default)
2012-09-07 17:55:25,453 DEBUG [ omeroweb.settings] (MainThread) LOGIN_VIEW = 'weblogin' (source:default)
2012-09-07 17:55:25,453 DEBUG [ omeroweb.settings] (MainThread) OPEN_ASTEX_MAX_SIDE = 500 (source:omero.web.open_astex_max_side)
2012-09-07 17:55:25,454 DEBUG [ omeroweb.settings] (MainThread) OPEN_ASTEX_MAX_VOXELS = 15625000 (source:omero.web.open_astex_max_voxels)
2012-09-07 17:55:25,454 DEBUG [ omeroweb.settings] (MainThread) OPEN_ASTEX_MIN_SIDE = 50 (source:omero.web.open_astex_min_side)
2012-09-07 17:55:25,454 DEBUG [ omeroweb.settings] (MainThread) PING_INTERVAL = 60000 (source:default)
2012-09-07 17:55:25,454 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_CACHE_ENABLED = False (source:default)
2012-09-07 17:55:25,454 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_CACHE_KEY = 'omero.web.public.cache.key' (source:default)
2012-09-07 17:55:25,454 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_CACHE_TIMEOUT = 86400 (source:default)
2012-09-07 17:55:25,454 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_ENABLED = True (source:omero.web.public.enabled)
2012-09-07 17:55:25,454 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_PASSWORD = '********************' (source:default)
2012-09-07 17:55:25,455 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_SERVER_ID = 1 (source:default)
2012-09-07 17:55:25,455 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_URL_FILTER = <_sre.SRE_Pattern object at 0x3386d30> (source:default)
2012-09-07 17:55:25,455 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_USER = None (source:default)
2012-09-07 17:55:25,455 DEBUG [ omeroweb.settings] (MainThread) SCRIPTS_TO_IGNORE = [] (source:omero.web.scripts_to_ignore)
2012-09-07 17:55:25,455 DEBUG [ omeroweb.settings] (MainThread) SEND_BROKEN_LINK_EMAILS = True (source:default)
2012-09-07 17:55:25,455 DEBUG [ omeroweb.settings] (MainThread) SERVER_EMAIL = None (source:default)
2012-09-07 17:55:25,455 DEBUG [ omeroweb.settings] (MainThread) SERVER_LIST = [['localhost', 4064, 'omero']] (source:default)
2012-09-07 17:55:25,456 DEBUG [ omeroweb.settings] (MainThread) SESSION_ENGINE = 'django.contrib.sessions.backends.file' (source:default)
2012-09-07 17:55:25,456 DEBUG [ omeroweb.settings] (MainThread) STATIC_URL = '/static/' (source:default)
2012-09-07 17:55:25,456 DEBUG [ omeroweb.settings] (MainThread) STATICFILES_DIRS = [] (source:default)
2012-09-07 17:55:25,456 DEBUG [ omeroweb.settings] (MainThread) CENTER_PLUGINS = [['Table', 'webclient/data/includes/center_plugin.table.js.html', 'image_table']] (source:default)
2012-09-07 17:55:25,456 DEBUG [ omeroweb.settings] (MainThread) RIGHT_PLUGINS = [['Acquisition', 'webclient/data/includes/right_plugin.acquisition.js.html', 'metadata_tab'], ['Preview', 'webclient/data/includes/right_plugin.preview.js.html', 'preview_tab']] (source:default)
2012-09-07 17:55:25,456 DEBUG [ omeroweb.settings] (MainThread) TOP_LINKS = [] (source:default)
2012-09-07 17:55:25,456 DEBUG [ omeroweb.settings] (MainThread) WEBGATEWAY_CACHE = None (source:default)
2012-09-07 17:55:25,457 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_CLASS = 'org.openmicroscopy.shoola.Main' (source:default)
2012-09-07 17:55:25,457 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_HEAP = '1024m' (source:default)
2012-09-07 17:55:25,457 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_HOMEPAGE = 'http://www.openmicroscopy.org' (source:default)
2012-09-07 17:55:25,457 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_HOST = 'localhost' (source:default)
2012-09-07 17:55:25,457 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_ICON = 'webstart/img/icon-omero-insight.png' (source:default)
2012-09-07 17:55:25,457 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_JAR = 'omero.insight.jar' (source:default)
2012-09-07 17:55:25,457 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_PORT = '4064' (source:default)
2012-09-07 17:55:25,457 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_TITLE = 'OMERO.insight' (source:default)
2012-09-07 17:55:25,458 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_VENDOR = 'The Open Microscopy Environment' (source:default)
2012-09-07 17:55:26,716 INFO [ __main__] (MainThread) Application Starting...
2012-09-07 17:55:26,727 DEBUG [ omeroweb.settings] (MainThread) ADMINS = [] (source:default)
2012-09-07 17:55:26,727 DEBUG [ omeroweb.settings] (MainThread) APPLICATION_SERVER = 'fastcgi-tcp' (source:omero.web.application_server)
2012-09-07 17:55:26,727 DEBUG [ omeroweb.settings] (MainThread) APPLICATION_SERVER_HOST = '0.0.0.0' (source:default)
2012-09-07 17:55:26,728 DEBUG [ omeroweb.settings] (MainThread) APPLICATION_SERVER_PORT = '4080' (source:default)
2012-09-07 17:55:26,728 DEBUG [ omeroweb.settings] (MainThread) ADDITIONAL_APPS = [] (source:default)
2012-09-07 17:55:26,728 DEBUG [ omeroweb.settings] (MainThread) CACHES = {} (source:default)
2012-09-07 17:55:26,728 DEBUG [ omeroweb.settings] (MainThread) DATABASES = {} (source:default)
2012-09-07 17:55:26,728 DEBUG [ omeroweb.settings] (MainThread) DEBUG = True (source:omero.web.debug)
2012-09-07 17:55:26,728 DEBUG [ omeroweb.settings] (MainThread) EMAIL_HOST = None (source:default)
2012-09-07 17:55:26,728 DEBUG [ omeroweb.settings] (MainThread) EMAIL_HOST_PASSWORD = '********************' (source:default)
2012-09-07 17:55:26,729 DEBUG [ omeroweb.settings] (MainThread) EMAIL_HOST_USER = None (source:default)
2012-09-07 17:55:26,729 DEBUG [ omeroweb.settings] (MainThread) EMAIL_PORT = None (source:default)
2012-09-07 17:55:26,729 DEBUG [ omeroweb.settings] (MainThread) EMAIL_SUBJECT_PREFIX = '[OMERO.web] ' (source:default)
2012-09-07 17:55:26,729 DEBUG [ omeroweb.settings] (MainThread) EMAIL_USE_TLS = False (source:default)
2012-09-07 17:55:26,729 DEBUG [ omeroweb.settings] (MainThread) INDEX_TEMPLATE = None (source:default)
2012-09-07 17:55:26,729 DEBUG [ omeroweb.settings] (MainThread) LOGDIR = '/opt/OMERO/OMERO.server/var/log' (source:default)
2012-09-07 17:55:26,729 DEBUG [ omeroweb.settings] (MainThread) LOGIN_VIEW = 'weblogin' (source:default)
2012-09-07 17:55:26,729 DEBUG [ omeroweb.settings] (MainThread) OPEN_ASTEX_MAX_SIDE = 500 (source:omero.web.open_astex_max_side)
2012-09-07 17:55:26,730 DEBUG [ omeroweb.settings] (MainThread) OPEN_ASTEX_MAX_VOXELS = 15625000 (source:omero.web.open_astex_max_voxels)
2012-09-07 17:55:26,730 DEBUG [ omeroweb.settings] (MainThread) OPEN_ASTEX_MIN_SIDE = 50 (source:omero.web.open_astex_min_side)
2012-09-07 17:55:26,730 DEBUG [ omeroweb.settings] (MainThread) PING_INTERVAL = 60000 (source:default)
2012-09-07 17:55:26,730 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_CACHE_ENABLED = False (source:default)
2012-09-07 17:55:26,730 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_CACHE_KEY = 'omero.web.public.cache.key' (source:default)
2012-09-07 17:55:26,730 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_CACHE_TIMEOUT = 86400 (source:default)
2012-09-07 17:55:26,730 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_ENABLED = True (source:omero.web.public.enabled)
2012-09-07 17:55:26,731 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_PASSWORD = '********************' (source:default)
2012-09-07 17:55:26,731 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_SERVER_ID = 1 (source:default)
2012-09-07 17:55:26,731 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_URL_FILTER = <_sre.SRE_Pattern object at 0x34a8d30> (source:default)
2012-09-07 17:55:26,731 DEBUG [ omeroweb.settings] (MainThread) PUBLIC_USER = None (source:default)
2012-09-07 17:55:26,731 DEBUG [ omeroweb.settings] (MainThread) SCRIPTS_TO_IGNORE = [] (source:omero.web.scripts_to_ignore)
2012-09-07 17:55:26,731 DEBUG [ omeroweb.settings] (MainThread) SEND_BROKEN_LINK_EMAILS = True (source:default)
2012-09-07 17:55:26,731 DEBUG [ omeroweb.settings] (MainThread) SERVER_EMAIL = None (source:default)
2012-09-07 17:55:26,732 DEBUG [ omeroweb.settings] (MainThread) SERVER_LIST = [['localhost', 4064, 'omero']] (source:default)
2012-09-07 17:55:26,732 DEBUG [ omeroweb.settings] (MainThread) SESSION_ENGINE = 'django.contrib.sessions.backends.file' (source:default)
2012-09-07 17:55:26,732 DEBUG [ omeroweb.settings] (MainThread) STATIC_URL = '/static/' (source:default)
2012-09-07 17:55:26,732 DEBUG [ omeroweb.settings] (MainThread) STATICFILES_DIRS = [] (source:default)
2012-09-07 17:55:26,732 DEBUG [ omeroweb.settings] (MainThread) CENTER_PLUGINS = [['Table', 'webclient/data/includes/center_plugin.table.js.html', 'image_table']] (source:default)
2012-09-07 17:55:26,732 DEBUG [ omeroweb.settings] (MainThread) RIGHT_PLUGINS = [['Acquisition', 'webclient/data/includes/right_plugin.acquisition.js.html', 'metadata_tab'], ['Preview', 'webclient/data/includes/right_plugin.preview.js.html', 'preview_tab']] (source:default)
2012-09-07 17:55:26,732 DEBUG [ omeroweb.settings] (MainThread) TOP_LINKS = [] (source:default)
2012-09-07 17:55:26,733 DEBUG [ omeroweb.settings] (MainThread) WEBGATEWAY_CACHE = None (source:default)
2012-09-07 17:55:26,733 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_CLASS = 'org.openmicroscopy.shoola.Main' (source:default)
2012-09-07 17:55:26,733 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_HEAP = '1024m' (source:default)
2012-09-07 17:55:26,733 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_HOMEPAGE = 'http://www.openmicroscopy.org' (source:default)
2012-09-07 17:55:26,733 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_HOST = 'localhost' (source:default)
2012-09-07 17:55:26,733 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_ICON = 'webstart/img/icon-omero-insight.png' (source:default)
2012-09-07 17:55:26,733 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_JAR = 'omero.insight.jar' (source:default)
2012-09-07 17:55:26,733 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_PORT = '4064' (source:default)
2012-09-07 17:55:26,734 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_TITLE = 'OMERO.insight' (source:default)
2012-09-07 17:55:26,734 DEBUG [ omeroweb.settings] (MainThread) WEBSTART_VENDOR = 'The Open Microscopy Environment' (source:default)
-------------- next part --------------
[Fri Sep 07 15:17:04 2012] [notice] FastCGI: process manager initialized (pid 29564)
PHP Warning: Module 'pgsql' already loaded in Unknown on line 0
[Fri Sep 07 15:17:04 2012] [notice] Apache/2.2.22 (Ubuntu) mod_fastcgi/mod_fastcgi-SNAP-0910052141 PHP/5.3.10-1ubuntu3.2 with Suhosin-Patch mod_ssl/2.2.22 OpenSSL/1.0.1 configured -- resuming normal operations
[Fri Sep 07 15:17:53 2012] [error] [client 134.157.183.40] (13)Permission denied: FastCGI: failed to connect to server "/opt/OMERO/OMERO.server/var/omero.fcgi": connect() failed
[Fri Sep 07 15:17:53 2012] [error] [client 134.157.183.40] FastCGI: incomplete headers (0 bytes) received from server "/opt/OMERO/OMERO.server/var/omero.fcgi"
[Fri Sep 07 15:17:53 2012] [error] [client 134.157.183.40] File does not exist: /var/www/favicon.ico
[Fri Sep 07 15:20:47 2012] [error] [client 134.157.183.40] File does not exist: /var/www/favicon.ico
[Fri Sep 07 15:21:45 2012] [error] [client 134.157.183.40] File does not exist: /var/www/favicon.ico
[Fri Sep 07 15:41:44 2012] [error] [client 134.157.183.40] File does not exist: /var/www/webclient
[Fri Sep 07 15:41:44 2012] [error] [client 134.157.183.40] File does not exist: /var/www/favicon.ico
[Fri Sep 07 15:48:00 2012] [notice] caught SIGTERM, shutting down
[Fri Sep 07 15:48:01 2012] [notice] FastCGI: process manager initialized (pid 30213)
PHP Warning: Module 'pgsql' already loaded in Unknown on line 0
[Fri Sep 07 15:48:01 2012] [notice] Apache/2.2.22 (Ubuntu) mod_fastcgi/mod_fastcgi-SNAP-0910052141 PHP/5.3.10-1ubuntu3.2 with Suhosin-Patch mod_ssl/2.2.22 OpenSSL/1.0.1 configured -- resuming normal operations
[Fri Sep 07 15:49:48 2012] [error] [client 134.157.183.40] File does not exist: /var/www/webclient
[Fri Sep 07 15:49:48 2012] [error] [client 134.157.183.40] File does not exist: /var/www/favicon.ico
[Fri Sep 07 15:51:13 2012] [error] [client 134.157.183.40] File does not exist: /var/www/webclient
[Fri Sep 07 15:51:13 2012] [error] [client 134.157.183.40] File does not exist: /var/www/favicon.ico
[Fri Sep 07 15:54:16 2012] [error] [client 134.157.183.40] File does not exist: /var/www/favicon.ico
[Fri Sep 07 15:54:28 2012] [error] [client 134.157.183.40] File does not exist: /var/www/webadmin
[Fri Sep 07 15:54:28 2012] [error] [client 134.157.183.40] File does not exist: /var/www/favicon.ico
[Fri Sep 07 16:18:52 2012] [error] [client 134.157.183.40] (13)Permission denied: FastCGI: failed to connect to server "/opt/OMERO/OMERO.server/var/omero.fcgi": connect() failed
[Fri Sep 07 16:18:52 2012] [error] [client 134.157.183.40] FastCGI: incomplete headers (0 bytes) received from server "/opt/OMERO/OMERO.server/var/omero.fcgi"
[Fri Sep 07 16:18:52 2012] [error] [client 134.157.183.40] File does not exist: /var/www/favicon.ico
[Fri Sep 07 17:39:59 2012] [error] [client 134.157.182.159] File does not exist: /var/www/webclient
[Fri Sep 07 17:39:59 2012] [error] [client 134.157.182.159] File does not exist: /var/www/favicon.ico
[Fri Sep 07 17:44:51 2012] [error] [client 134.157.182.159] File does not exist: /var/www/webclient
[Fri Sep 07 17:44:51 2012] [error] [client 134.157.182.159] File does not exist: /var/www/favicon.ico
-------------- next part --------------
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