[ome-users] (no subject)

Mario Emmenlauer mario at emmenlauer.de
Tue Aug 28 07:39:18 BST 2012


Dear Melissa,

thanks a lot for the very very quick and helpful response!
I'll test the development build ASAP.

Cheers,

     Mario



On 08/27/2012 04:55 PM, Melissa Linkert wrote:
> Hi Mario,
>
>> I'm trying to read comment fields from a lossless compressed JPEG200
>> file, created with Matlab (R2011b, in case it matters). Matlab supports
>> setting a list of arbitrary comments in the file, by specifying a cell
>> array of strings as a parameter to imwrite().
>> See http://www.mathworks.ch/help/techdoc/ref/imwrite.html#bsfqp3l-1.
>>
>> I'll send a corresponding image in a separate email. Is it possible
>> to read the comment fields with BioFormats?
>
> Thank you for mentioning this, and for sending a file privately.
>
> This commit allows the comments to be read and stored in Bio-Formats'
> original metadata hashtable:
>
> https://github.com/melissalinkert/bioformats/commit/eed5a864fb928511a84f9ec48376639b4431b49e
>
> A new development build with that fix should be available within a few
> days, otherwise the upcoming 4.4.3 version of Bio-Formats will include
> this fix.
>
> Regards,
> -Melissa
>
> On Mon, Aug 27, 2012 at 01:54:09PM +0200, Mario Emmenlauer wrote:
>>
>> Dear OME Developers,
>>
>> I'm trying to read comment fields from a lossless compressed JPEG200
>> file, created with Matlab (R2011b, in case it matters). Matlab supports
>> setting a list of arbitrary comments in the file, by specifying a cell
>> array of strings as a parameter to imwrite().
>> See http://www.mathworks.ch/help/techdoc/ref/imwrite.html#bsfqp3l-1.
>>
>> I'll send a corresponding image in a separate email. Is it possible
>> to read the comment fields with BioFormats?
>>
>> Thanks and all the best,
>>
>>     Mario
>>
>>
>>
>>
>> --
>> Mario Emmenlauer, Dipl.Inf.                  Office: +41-(0)61-26-72200
>> Biozentrum Basel
>> Klingelbergstrasse 50/70           mailto: mario.emmenlauer * unibas.ch
>> CH-4056 Basel                     http://infectx.org/about_us/emmenlau/
>>
>>
>> _______________________________________________
>> ome-users mailing list
>> ome-users at lists.openmicroscopy.org.uk
>> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users
>



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