[ome-users] LZW-compression not working for large tiles

[Matthias Baldauf]

Hi Melissa,

> What you're doing now is fine, the only issue is that Bio-Formats'
> OME-TIFF reader doesn't correctly pick up the XMLAnnotations and pass
> them into OMERO.  There is a ticket for that filed here:
> 
> http://trac.openmicroscopy.org.uk/ome/ticket/9457
> 

> That is expected, as per this ticket:
> 
> http://trac.openmicroscopy.org.uk/ome/ticket/6713
> 
> Images that qualify as "big images" (by default, width * height > 3192 * 3192)
> cannot be exported at all at the moment as far as I can see.  Note that
> the definition of what qualifies as a big image can be configured by
> changing the omero.pixeldata.max_plane_width and
> omero.pixeldata.max_plane_height properties in the OMERO server's
> etc/omero.properties file.

Thank you very much for your answers!
If you have any further questions about the NDPI to OME-TIFF Converter, feel free to contact me.

Regards,
Matthias