[ome-users] Installation under Windows server 2008

Anatole Chessel ac744 at cam.ac.uk
Tue Feb 15 14:05:08 GMT 2011


Dear all,

   I seem to encounter problems trying to install an omero server under 
windows server 2008.

   First I run into the 'pywintypes.error: (5, 'OpenSCManager', 'Access 
is denied.')' error signaled elsewhere 
(http://www.openmicroscopy.org/community/viewtopic.php?f=5&t=586). I 
managed to get pass that by running the prompt as administrator 
(right-click->run as administrator) (which seems to be different from 
running it from an administrator account, more like a sudo I guess). If 
somebody have a better solution, it might be what cause the errors below...

   I think I have all the prerequisites right, however the server fail 
to start properly... Two logs are attached, I am not sure what to make 
of them; below is the result of the 'start' and 'diagnostics' commands.

   I looked for info on omero on windows server 2008 but could not find 
anything special; is anybody running it? Is there any plan for an 
'official' support? Last question, it seems omero.fs is not running (W. 
server 2008 is recognized as Vista, which does not support that 
feature); are there any plan for that? I guess I certainly would not be 
against (to say the least) running a linux server, but I may have to 
stick to windows for this one...

Thank you very much for your help...



PS C:\Users\omero\Desktop\OMERO.server-Beta-4.2.2> .\bin\omero admin start
No descriptor given. Using etc\grid\windefault.xml
[SC] CreateService SUCCESS


SERVICE_NAME: OMERO.master
         TYPE               : 10  WIN32_OWN_PROCESS
         STATE              : 2  START_PENDING
                                 (NOT_STOPPABLE, NOT_PAUSABLE, 
IGNORES_SHUTDOWN)
         WIN32_EXIT_CODE    : 0  (0x0)
         SERVICE_EXIT_CODE  : 0  (0x0)
         CHECKPOINT         : 0x0
         WAIT_HINT          : 0x7d0
         PID                : 5756
         FLAGS              :

Waiting on startup. Use CTRL-C to exit
.............................
Failed to startup some components after 5 minutes
Calling "stop" on remaining components

SERVICE_NAME: OMERO.master
         TYPE               : 10  WIN32_OWN_PROCESS
         STATE              : 4  RUNNING
                                 (STOPPABLE, NOT_PAUSABLE, 
ACCEPTS_SHUTDOWN)
         WIN32_EXIT_CODE    : 0  (0x0)
         SERVICE_EXIT_CODE  : 0  (0x0)
         CHECKPOINT         : 0x0
         WAIT_HINT          : 0x0

[SC] DeleteService SUCCESS

Waiting on shutdown. Use CTRL-C to exit
..PS C:\Users\omero\Desktop\OMERO.server-Beta-4.2.2>

PS C:\Users\omero\Desktop\OMERO.server-Beta-4.2.2> .\bin\omero admin 
diagnostics

================================================================================ 

OMERO Diagnostics Beta4.2.2-r8718-Beta4.2-b56
================================================================================ 


Commands:   java -version                  1.6.0     
(C:\Windows\system32\java.EXE)
Commands:   python -V                      2.5.5     
(C:\Python25\python.EXE)
Commands:   icegridnode --version          3.3.1     
(C:\Ice-3.3.1\bin\icegridnode.EXE)
Commands:   icegridadmin --version         3.3.1     
(C:\Ice-3.3.1\bin\icegridadmin.EXE)
Commands:   psql --version                 not found

Server:     icegridnode                    not started

Log dir:    C:\Users\omero\Desktop\OMERO.server-Beta-4.2.2\var\log exists

Log files:  Blitz-0.log                    41.0 KB       errors=2    
warnings=10
Log files:  DropBox.log                    1.0 KB        errors=4    
warnings=0
Log files:  FileServer.log                 0.0 KB
Log files:  Indexer-0.log                  57.0 KB       errors=2    
warnings=9
Log files:  MonitorServer.log              2.0 KB        errors=2    
warnings=0
Log files:  OMEROweb.log                   0.0 KB
Log files:  Processor-0.log                62.0 KB       errors=17   
warnings=119
Log files:  Tables-0.log                   n/a
Log files:  TestDropBox.log                n/a
Log files:  master.err                     0.0 KB
Log files:  master.out                     0.0 KB
Log files:  Total size                     0.17 MB

Parsing Blitz-0.log:[line:104] Did you create your omero.data.dir? E.g. 
/OMERO

Environment:OMERO_HOME=(unset)
Environment:OMERO_NODE=(unset)
Environment:OMERO_MASTER=(unset)
Environment:PATH=C:\Windows\system32\WindowsPowerShell\v1.0\;'C:\Program 
Files (x86)\Java\jre6\bin\';C:\Python25\;C:\Win
dows\system32;C:\Windows;C:\Windows\System32\Wbem;C:\Windows\System32\WindowsPowerShell\v1.0\;C:\Ice-3.3.1\bin 

Environment:ICE_HOME=(unset)
Environment:LD_LIBRARY_PATH=(unset)
Environment:DYLD_LIBRARY_PATH=(unset)

OMERO data dir: 'E:\\OMERO'     Exists? True    Is writable? True
OMERO.web status... [NOT STARTED]
PS C:\Users\omero\Desktop\OMERO.server-Beta-4.2.2>

-- 
Anatole Chessel
Research associate
The Gurdon Institute
University of Cambridge
Tennis Court Road, Cambridge CB2 1QN
tel: +44 (0)1223 767197

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