[ome-users] omero changing group ownership
Wood, Christopher
CJW at stowers.org
Thu Apr 21 15:45:58 BST 2011
Hi,
Is it possible to move projects/datasets/images from one permission group to another?
For example, if use Importer and import under a certain group, can I later change what group the that data belongs to.
I have tried to copy/paste in Insight but I get errors about security (see below):
Thanks
Chris
java.lang.Exception: org.openmicroscopy.shoola.env.data.DSAccessException: For security reasons, cannot access data.
Cannot create the objects.
at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:781)
at org.openmicroscopy.shoola.env.data.OMEROGateway.createObjects(OMEROGateway.java:2730)
at org.openmicroscopy.shoola.env.data.OmeroDataServiceImpl.addExistingObjects(OmeroDataServiceImpl.java:553)
at org.openmicroscopy.shoola.env.data.views.calls.ExistingObjectsSaver$2.doCall(ExistingObjectsSaver.java:126)
at org.openmicroscopy.shoola.env.data.views.BatchCall.doStep(BatchCall.java:144)
at org.openmicroscopy.shoola.util.concur.tasks.CompositeTask.doStep(CompositeTask.java:226)
at org.openmicroscopy.shoola.env.data.views.CompositeBatchCall.doStep(CompositeBatchCall.java:126)
at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.exec(ExecCommand.java:165)
at org.openmicroscopy.shoola.util.concur.tasks.ExecCommand.run(ExecCommand.java:274)
at org.openmicroscopy.shoola.util.concur.tasks.AsyncProcessor$Runner.run(AsyncProcessor.java:91)
at java.lang.Thread.run(Unknown Source)
Caused by: org.openmicroscopy.shoola.env.data.DSAccessException: Cannot access data.
Cannot update the object.
at org.openmicroscopy.shoola.env.data.OMEROGateway.handleException(OMEROGateway.java:802)
at org.openmicroscopy.shoola.env.data.OMEROGateway.saveAndReturnObject(OMEROGateway.java:2830)
at org.openmicroscopy.shoola.env.data.OMEROGateway.createObjects(OMEROGateway.java:2728)
... 9 more
Caused by: omero.SecurityViolation
serverStackTrace = "ome.conditions.SecurityViolation: Cannot read ome.model.containers.Dataset:Id_653
at ome.security.basic.BasicACLVoter.throwLoadViolation(BasicACLVoter.java:112)
at ome.security.CompositeACLVoter.throwLoadViolation(CompositeACLVoter.java:86)
at ome.security.ACLEventListener.onPostLoad(ACLEventListener.java:104)
at org.hibernate.engine.TwoPhaseLoad.initializeEntity(TwoPhaseLoad.java:234)
at org.hibernate.loader.Loader.initializeEntitiesAndCollections(Loader.java:898)
at org.hibernate.loader.Loader.doQuery(Loader.java:773)
at org.hibernate.loader.Loader.doQueryAndInitializeNonLazyCollections(Loader.java:270)
at org.hibernate.loader.Loader.loadEntity(Loader.java:1933)
at org.hibernate.loader.entity.AbstractEntityLoader.load(AbstractEntityLoader.java:86)
at org.hibernate.loader.entity.AbstractEntityLoader.load(AbstractEntityLoader.java:76)
at org.hibernate.persister.entity.AbstractEntityPersister.load(AbstractEntityPersister.java:3270)
at org.hibernate.event.def.DefaultLoadEventListener.loadFromDatasource(DefaultLoadEventListener.java:496)
at org.hibernate.event.def.DefaultLoadEventListener.doLoad(DefaultLoadEventListener.java:477)
at org.hibernate.event.def.DefaultLoadEventListener.load(DefaultLoadEventListener.java:227)
at org.hibernate.event.def.DefaultLoadEventListener.onLoad(DefaultLoadEventListener.java:147)
at org.hibernate.impl.SessionImpl.fireLoad(SessionImpl.java:1080)
at org.hibernate.impl.SessionImpl.immediateLoad(SessionImpl.java:1018)
at org.hibernate.proxy.AbstractLazyInitializer.initialize(AbstractLazyInitializer.java:176)
at org.hibernate.proxy.AbstractLazyInitializer.getImplementation(AbstractLazyInitializer.java:215)
at org.hibernate.proxy.pojo.javassist.JavassistLazyInitializer.invoke(JavassistLazyInitializer.java:191)
at ome.model.containers.Dataset_$$_javassist_2.getDetails(Dataset_$$_javassist_2.java)
at ome.security.basic.OmeroInterceptor.evaluateLinkages(OmeroInterceptor.java:371)
at ome.security.basic.OmeroInterceptor.onSave(OmeroInterceptor.java:155)
at org.hibernate.event.def.AbstractSaveEventListener.substituteValuesIfNecessary(AbstractSaveEventListener.java:414)
at org.hibernate.event.def.AbstractSaveEventListener.performSaveOrReplicate(AbstractSaveEventListener.java:293)
at org.hibernate.event.def.AbstractSaveEventListener.performSave(AbstractSaveEventListener.java:204)
at org.hibernate.event.def.AbstractSaveEventListener.saveWithGeneratedId(AbstractSaveEventListener.java:144)
at org.hibernate.event.def.DefaultMergeEventListener.mergeTransientEntity(DefaultMergeEventListener.java:313)
at org.hibernate.event.def.DefaultMergeEventListener.entityIsTransient(DefaultMergeEventListener.java:282)
at org.springframework.orm.hibernate3.support.IdTransferringMergeEventListener.entityIsTransient(IdTransferringMergeEventListener.java:59)
at ome.security.basic.MergeEventListener.entityIsTransient(MergeEventListener.java:135)
at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:237)
at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:85)
at org.hibernate.event.def.DefaultMergeEventListener.onMerge(DefaultMergeEventListener.java:84)
at ome.security.basic.MergeEventListener.onMerge(MergeEventListener.java:75)
at org.hibernate.impl.SessionImpl.fireMerge(SessionImpl.java:859)
at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:843)
at org.hibernate.impl.SessionImpl.merge(SessionImpl.java:847)
at ome.logic.UpdateImpl.internalMerge(UpdateImpl.java:273)
at ome.logic.UpdateImpl$4.run(UpdateImpl.java:148)
at ome.logic.UpdateImpl$4.run(UpdateImpl.java:143)
at ome.logic.UpdateImpl.doAction(UpdateImpl.java:311)
at ome.logic.UpdateImpl.doAction(UpdateImpl.java:302)
at ome.logic.UpdateImpl.saveAndReturnArray(UpdateImpl.java:143)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
at ome.security.basic.EventHandler.invoke(EventHandler.java:157)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at org.springframework.orm.hibernate3.HibernateInterceptor.invoke(HibernateInterceptor.java:111)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:108)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at ome.tools.hibernate.ProxyCleanupFilter$Interceptor.invoke(ProxyCleanupFilter.java:231)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at ome.services.util.ServiceHandler.invoke(ServiceHandler.java:111)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
at $Proxy74.saveAndReturnArray(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:307)
at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:183)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:150)
at ome.security.basic.BasicSecurityWiring.invoke(BasicSecurityWiring.java:83)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at ome.services.blitz.fire.AopContextInitializer.invoke(AopContextInitializer.java:40)
at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:172)
at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:202)
at $Proxy74.saveAndReturnArray(Unknown Source)
at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:39)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:25)
at java.lang.reflect.Method.invoke(Method.java:597)
at ome.services.blitz.util.IceMethodInvoker.invoke(IceMethodInvoker.java:179)
at ome.services.throttling.Callback.run(Callback.java:56)
at ome.services.throttling.InThreadThrottlingStrategy.callInvokerOnRawArgs(InThreadThrottlingStrategy.java:56)
at ome.services.blitz.impl.AbstractAmdServant.callInvokerOnRawArgs(AbstractAmdServant.java:136)
at ome.services.blitz.impl.UpdateI.saveAndReturnArray_async(UpdateI.java:58)
at omero.api._IUpdateTie.saveAndReturnArray_async(_IUpdateTie.java:78)
at omero.api._IUpdateDisp.___saveAndReturnArray(_IUpdateDisp.java:229)
at omero.api._IUpdateDisp.__dispatch(_IUpdateDisp.java:357)
at IceInternal.Incoming.invoke(Incoming.java:159)
at Ice.ConnectionI.invokeAll(ConnectionI.java:2037)
at Ice.ConnectionI.message(ConnectionI.java:972)
at IceInternal.ThreadPool.run(ThreadPool.java:577)
at IceInternal.ThreadPool.access$100(ThreadPool.java:12)
at IceInternal.ThreadPool$EventHandlerThread.run(ThreadPool.java:971)
"
serverExceptionClass = "ome.conditions.SecurityViolation"
message = "Cannot read ome.model.containers.Dataset:Id_653"
at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
at sun.reflect.NativeConstructorAccessorImpl.newInstance(Unknown Source)
at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(Unknown Source)
at java.lang.reflect.Constructor.newInstance(Unknown Source)
at java.lang.Class.newInstance0(Unknown Source)
at java.lang.Class.newInstance(Unknown Source)
at IceInternal.BasicStream$DynamicUserExceptionFactory.createAndThrow(BasicStream.java:2243)
at IceInternal.BasicStream.throwException(BasicStream.java:1632)
at IceInternal.Outgoing.throwUserException(Outgoing.java:442)
at omero.api._IUpdateDelM.saveAndReturnArray(_IUpdateDelM.java:139)
at omero.api.IUpdatePrxHelper.saveAndReturnArray(IUpdatePrxHelper.java:186)
at omero.api.IUpdatePrxHelper.saveAndReturnArray(IUpdatePrxHelper.java:158)
at org.openmicroscopy.shoola.env.data.OMEROGateway.saveAndReturnObject(OMEROGateway.java:2828)
... 10 more
at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.showErrorDialog(UserNotifierImpl.java:159)
at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.notifyError(UserNotifierImpl.java:246)
at org.openmicroscopy.shoola.env.ui.UserNotifierImpl.notifyError(UserNotifierImpl.java:218)
at org.openmicroscopy.shoola.agents.treeviewer.DataTreeViewerLoader.handleException(DataTreeViewerLoader.java:170)
at org.openmicroscopy.shoola.env.data.events.DSCallAdapter.eventFired(DSCallAdapter.java:84)
at org.openmicroscopy.shoola.env.data.views.BatchCallMonitor$1.run(BatchCallMonitor.java:124)
at java.awt.event.InvocationEvent.dispatch(Unknown Source)
at java.awt.EventQueue.dispatchEventImpl(Unknown Source)
at java.awt.EventQueue.access$000(Unknown Source)
at java.awt.EventQueue$1.run(Unknown Source)
at java.awt.EventQueue$1.run(Unknown Source)
at java.security.AccessController.doPrivileged(Native Method)
at java.security.AccessControlContext$1.doIntersectionPrivilege(Unknown Source)
at java.awt.EventQueue.dispatchEvent(Unknown Source)
at java.awt.EventDispatchThread.pumpOneEventForFilters(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForFilter(Unknown Source)
at java.awt.EventDispatchThread.pumpEventsForHierarchy(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.pumpEvents(Unknown Source)
at java.awt.EventDispatchThread.run(Unknown Source)
Thanks
Chris
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