[ome-users] Ice::SocketException

Arcieri, Kenneth (NIH/NICHD) [V] kenneth.arcieri at nih.gov
Tue Apr 27 16:32:03 BST 2010


There seem to be a lot of different things going on here, but here are my thoughts:

1. Pytables cannot find the "libhdf5.so" library.  You are going to need to update the paths in your user to reflect this.
2. Is it possible that the network address you are trying to bind the server to is already in use?  Maybe the server you are running Omero on has another service running that it is conflicting with?

Any comments from the list-serv?

-Ken
________________________________________
From: Baek Hwan (BK) Cho [bhcho at cmu.edu]
Sent: Monday, April 26, 2010 4:41 PM
To: ome-users at lists.openmicroscopy.org.uk
Subject: [ome-users] Ice::SocketException

My OMERO server starts smoothly and the omero.web is working under
non-production mode.
But after a while, it is suddenly not able to be accessed.

There was no error when I do bin/omero admin diagnostics, but in the
"master.err" file,
there are some errors written like below.



04/26/10 15:44:24.156 OMERO.Glacier2: error: service caught unhandled
exception:
Network.cpp:1081: Ice::SocketException:
socket exception: Address already in use
 Traceback(most recent call last):
  File "lib/python/runTables.py", line 13, in <module>
    __import__("tables")
  File "/usr/lib64/python2.5/site-packages/tables/__init__.py", line 56, in
<module>
    from tables.utilsExtension import getPyTablesVersion, getHDF5Version
ImportError: libhdf5.so.6: cannot open shared object file: No such file or
directory
04/26/10 15:44:24.667 OMERO.Glacier2: error: service caught unhandled
exception:
Network.cpp:1081: Ice::SocketException:
socket exception: Address already in use
04/26/10 15:44:25.177 OMERO.Glacier2: error: service caught unhandled
exception:
Network.cpp:1081: Ice::SocketException:
socket exception: Address already in use
Apr 26, 2010 3:44:25 PM java.util.prefs.FileSystemPreferences$7 run
WARNING: Prefs file removed in background
/afs/cs.cmu.edu/misc/java/amd64_f10/jdk1.6.0_16/libexec/jdk1.6.0_16-64bit/jr
e/.systemPrefs/prefs.xml
04/26/10 15:44:25.688 OMERO.Glacier2: error: service caught unhandled
exception:
Network.cpp:1081: Ice::SocketException:
socket exception: Address already in use
Apr 26, 2010 3:44:25 PM java.util.prefs.FileSystemPreferences$7 run
WARNING: Prefs file removed in background
/afs/cs.cmu.edu/misc/java/amd64_f10/jdk1.6.0_16/libexec/jdk1.6.0_16-64bit/jr
e/.systemPrefs/prefs.xml
04/26/10 15:44:26.198 OMERO.Glacier2: error: service caught unhandled
exception:
Network.cpp:1081: Ice::SocketException:
socket exception: Address already in use
04/26/10 15:44:26.717 OMERO.Glacier2: error: service caught unhandled
exception:
Network.cpp:1081: Ice::SocketException:
socket exception: Address already in use
.... the same error message keeps going


Can anyone have any idea about this?

Thanks,
BK

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