[ome-users] Making Omero work with Ice

josh.moore at gmx.de josh.moore at gmx.de
Wed Mar 25 19:23:11 GMT 2009


Paulo Almeida writes:
 > Hi again...
 > 
 > Ignore my last e-mail, it really was a simple permissions problem. I didn't 
 > think it was because I tried running as root, but the directory was mounted 
 > in NFS so root didn't have access either. It seems to be running fine now.

Whew. Good to hear! :) Thanks for letting us know, Paulo.

~J.

 > Best,
 > Paulo
 > 
 > On Wednesday 25 March 2009 18:04:11 Paulo Almeida wrote:
 > > Hi,
 > >
 > > I had an OmeroGrid installation that was working, but I had to reinstall
 > > the OS and now I am getting an error. When I run:
 > >
 > > bin/omero admin start
 > >
 > > there is not output, but then I run:
 > >
 > > bin/omero admin deploy etc/grid/default.xml
 > >
 > > and I get this:
 > >
 > > error: IceGrid::DeploymentException:
 > > couldn't load `Blitz-0' on node `master':
 > > can't set permissions on directory
 > > `/mnt/OMERO_test/OMERO/dist/var/master/servers/Blitz-0'
 > >
 > > -----------
 > >
 > > When I reinstalled the OS I had to install Ice, PostgreSQL, etc, but I
 > > didn't touch the Omero folder. Do you have any idea about what I may have
 > > forgotten that would cause this error? I also tried compiling Omero.blitz,
 > > but I get this error when running 'bin/omero admin start':
 > >
 > > icegridnode: failure occurred in daemon:
 > > service caught unhandled Ice exception:
 > > ../../include/Ice/BasicStream.h:412: Ice::UnmarshalOutOfBoundsException:
 > > protocol error: out of bounds during unmarshaling
 > > from /mnt/OMERO_test/OMERO_blitz/dist/var/log/master.err:
 > > ../../include/Ice/BasicStream.h:412: Ice::UnmarshalOutOfBoundsException:
 > > protocol error: out of bounds during unmarshaling



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