[ome-users] Re : icegridnode: failure occurred in daemon

[josh.moore at gmx.de]

Hi Yves,

the properties do look correct, but unless you modified master.cfg
there should be nothing wrong in it. ERROR messages saying that the
server can't be reached are due to the OMERO.server not being able to
start up since it can't connect to the database.

Looking again in your logs, I did find these error messages:

   to deploy application `/home/yves/Desktop/omero_dist/etc/grid/default.xml':
   DescriptorParser.cpp:780: IceXML::ParserException
   error in </home/yves/Desktop/omero_dist/etc/grid/default.xml> descriptor, line 26, column 6:
   invalid element value for element `properties'

and

  ERROR: transport error 202: bind failed: Address already in use
  ERROR: JDWP Transport dt_socket failed to initialize, TRANSPORT_INIT(510)

If you modified default.xml, could you send that to us as well? You
might also try running without DEBUG=1, since the bind issues could
also be keeping your server from starting.

Perhaps you could delete var/ before trying. There might be some
interactions at play that I can't (easily) follow in the logs.

Best wishes,
~Josh.

yves fogue writes:
 > 
 > 
 > hey Josh
 > here are the outputs  of the command lines i ran
 > [yves at localhost omero_dist]$ bin/omero config get
 > omero.db.host=localhost
 > omero.db.name=omero
 > omero.db.pass=omerogre
 > omero.db.user=omero
 > 
 > [yves at localhost omero_dist]$ psql -h localhost -U omero -l
 >         List of databases
 >    Name    |  Owner   | Encoding 
 > -----------+----------+----------
 >  basedb    | yves     | UTF8
 >  omero     | omero    | UTF8
 >  postgres  | postgres | UTF8
 >  template0 | postgres | UTF8
 >  template1 | postgres | UTF8
 >  
 > it sounds like everything is okay. The bad feeling i have is much
 > more about master.cfg. I dont know whether its config is good
 > because its like the server is unreachable.  i attached to this
 > mail the master.cfg , ice.config and internal.cfg regards yves
 > 
 > 
 > ________________________________
 > De : "josh.moore at gmx.de" <josh.moore at gmx.de>
 > À : yves fogue <fogue1 at yahoo.fr>
 > Cc : ome-users at lists.openmicroscopy.org.uk
 > Envoyé le : Mardi, 30 Juin 2009, 16h30mn 18s
 > Objet : [ome-users] icegridnode: failure occurred in daemon
 > 
 > 
 > Hi Yves,
 > 
 > Thanks for the logs! At the bottom of your Blitz-0.log there's the
 > line:
 > 
 >   Caused by: org.postgresql.util.PSQLException: ERROR: permission denied
 >   for relation seq_table
 > 
 > Did you create the database with "-O omero", and if not, did you set
 > the omero.db.user configuration value: "bin/omero config set
 > omero.db.user SomebodyElse"
 > 
 > If that's not the issue, perhaps it's the password. Try:
 > 
 >   psql -h YOURDBHOST -U YOURDBUSER YOURDBNAME
 >   Password:
 > 
 > Until that works, the server won't be able to start. You might see:
 > 
 >   https://www.openmicroscopy.org/site/support/omero4/server/postgresql
 >   https://www.openmicroscopy.org/site/documents/data-management/omero4/troubleshooting
 > 
 > for more help.
 > 
 > Best wishes,
 > ~Josh
 > 
 > 
 > yves fogue writes:
 > > Hi all,
 > > Facing some issues with Omero installation. I've got the following
 > > error while running DEBUG=1 bin/omero admin start No descriptor
 > > given. Using etc/grid/default.xml Executing: ['icegridnode',
 > > '--daemon', '--pidfile',
 > > '/home/yves/Desktop/omero_dist/var/master/master.pid', '--nochdir',
 > > '--Ice.Config=/home/yves/Desktop/omero_dist/etc/internal.cfg,/home/yves/Desktop/omero_dist/etc/master.cfg',
 > > '--deploy', '/home/yves/Desktop/omero_dist/etc/grid/default.xml']
 > > icegridnode: failure occurred in daemon
 > > 
 > > You will find attached to this mail my log directory
 > > regards,
 > > yves
 > 
 > 
 > 
 >