[ome-users] OMERO: import image series spread across multiple files

[Brian Loranger]

Hi Bram,

The importer does support a number of multi-file series formats if the  
format has a meta file defining the layout (for example, in leica  
files). Unfortunately, we have yet to add functionality to define your  
own series from a collection of images such as tiffs. A shortcoming we  
hope to fix in an upcoming release.

If you are dealing with raw tiff files, you should be able to use  
ImageJ to import them as a series and then export them as an ome  
stack. This should import fine.

Brian Loranger
Software Developer, Open Microscopy Environment
Division of Gene Regulation and Expression
University of Dundee
(The University of Dundee is a registered Scottish charity, No:  
SC015096)

On 15 Jun 2009, at 16:16, <b.gerritsen at nki.nl> <b.gerritsen at nki.nl>  
wrote:

> Dear all,
>
> The OMERO.importer (version 4.0.1) gui and cli do not seem to  
> support the import of image series that are spread across multiple  
> files. How can one import these image series into omero?
>
> Kind Regards,
> Bram Gerritsen
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