[ome-users] Re : Re : icegridnode: failure occurred in daemon

[josh.moore at gmx.de]

Hi Yves,

sorry if I wasn't clear. Deleting var wasn't intended to fix the
problem, just to make it clearer in the logs what was
happening. First, though, you'll need to change this:

      property name="omero.db.host" value="localhost"
      property name="omero.db.name" value="omero"
      property name="omero.db.user" value="omero"
      property name="omero.db.pass" value="omerogre"

to

      <property name="omero.db.host" value="localhost"/>
      <property name="omero.db.name" value="omero"/>
      <property name="omero.db.user" value="omero"/>
      <property name="omero.db.pass" value="omerogre"/>

in default.xml.

Hope that helps.
~Josh.

yves fogue writes:

 > hey Josh, I deleted my var directory but it doesnt settle the
 > issue.( icegridnode: failure occurred in daemon). My defaut.xml is
 > attached to this mail.  regards, yves
 > 
 > 
 > 
 > 
 > ________________________________
 > De : "josh.moore at gmx.de" <josh.moore at gmx.de>
 > À : yves fogue <fogue1 at yahoo.fr>
 > Cc : ome-users at lists.openmicroscopy.org.uk
 > Envoyé le : Mardi, 30 Juin 2009, 17h39mn 07s
 > Objet : Re : [ome-users] icegridnode: failure occurred in daemon
 > 
 > 
 > Hi Yves,
 > 
 > the properties do look correct, but unless you modified master.cfg
 > there should be nothing wrong in it. ERROR messages saying that the
 > server can't be reached are due to the OMERO.server not being able to
 > start up since it can't connect to the database.
 > 
 > Looking again in your logs, I did find these error messages:
 > 
 >    to deploy application `/home/yves/Desktop/omero_dist/etc/grid/default.xml':
 >    DescriptorParser.cpp:780: IceXML::ParserException
 >    error in </home/yves/Desktop/omero_dist/etc/grid/default.xml> descriptor, line 26, column 6:
 >    invalid element value for element `properties'
 > 
 > and
 > 
 >   ERROR: transport error 202: bind failed: Address already in use
 >   ERROR: JDWP Transport dt_socket failed to initialize, TRANSPORT_INIT(510)
 > 
 > If you modified default.xml, could you send that to us as well? You
 > might also try running without DEBUG=1, since the bind issues could
 > also be keeping your server from starting.
 > 
 > Perhaps you could delete var/ before trying. There might be some
 > interactions at play that I can't (easily) follow in the logs.
 > 
 > Best wishes,
 > ~Josh.
 > 
 > yves fogue writes:
 > > 
 > > 
 > > hey Josh
 > > here are the outputs  of the command lines i ran
 > > [yves at localhost omero_dist]$ bin/omero config get
 > > omero.db.host=localhost
 > > omero.db.name=omero
 > > omero.db.pass=omerogre
 > > omero.db.user=omero
 > > 
 > > [yves at localhost omero_dist]$ psql -h localhost -U omero -l
 > >         List of databases
 > >    Name    |  Owner   | Encoding 
 > > -----------+----------+----------
 > >  basedb    | yves     | UTF8
 > >  omero     | omero    | UTF8
 > >  postgres  | postgres | UTF8
 > >  template0 | postgres | UTF8
 > >  template1 | postgres | UTF8
 > >  
 > > it sounds like everything is okay. The bad feeling i have is much
 > > more about master.cfg. I dont know whether its config is good
 > > because its like the server is unreachable.  i attached to this
 > > mail the master.cfg , ice.config and internal.cfg regards yves
 > > 
 > > 
 > > ________________________________
 > > De : "josh.moore at gmx.de" <josh.moore at gmx.de>
 > > À : yves fogue <fogue1 at yahoo.fr>
 > > Cc : ome-users at lists.openmicroscopy.org.uk
 > > Envoyé le : Mardi, 30 Juin 2009, 16h30mn 18s
 > > Objet : [ome-users] icegridnode: failure occurred in daemon
 > > 
 > > 
 > > Hi Yves,
 > > 
 > > Thanks for the logs! At the bottom of your Blitz-0.log there's the
 > > line:
 > > 
 > >   Caused by: org.postgresql.util.PSQLException: ERROR: permission denied
 > >   for relation seq_table
 > > 
 > > Did you create the database with "-O omero", and if not, did you set
 > > the omero.db.user configuration value: "bin/omero config set
 > > omero.db.user SomebodyElse"
 > > 
 > > If that's not the issue, perhaps it's the password. Try:
 > > 
 > >   psql -h YOURDBHOST -U YOURDBUSER YOURDBNAME
 > >   Password:
 > > 
 > > Until that works, the server won't be able to start. You might see:
 > > 
 > >  https://www.openmicroscopy.org/site/support/omero4/server/postgresql
 > >  https://www.openmicroscopy.org/site/documents/data-management/omero4/troubleshooting
 > > 
 > > for more help.
 > > 
 > > Best wishes,
 > > ~Josh
 > > 
 > > 
 > > yves fogue writes:
 > > > Hi all,
 > > > Facing some issues with Omero installation. I've got the following
 > > > error while running DEBUG=1 bin/omero admin start No descriptor
 > > > given. Using etc/grid/default.xml Executing: ['icegridnode',
 > > > '--daemon', '--pidfile',
 > > > '/home/yves/Desktop/omero_dist/var/master/master.pid', '--nochdir',
 > > > '--Ice.Config=/home/yves/Desktop/omero_dist/etc/internal.cfg,/home/yves/Desktop/omero_dist/etc/master.cfg',
 > > > '--deploy', '/home/yves/Desktop/omero_dist/etc/grid/default.xml']
 > > > icegridnode: failure occurred in daemon
 > > > 
 > > > You will find attached to this mail my log directory
 > > > regards,
 > > > yves
 > > 
 > > 
 > > 
 > >      
 > 
 > 
 > 
 >