[ome-users] ome-users Digest, Vol 47, Issue 8 - Importing ANALYZE 7.5 and NIFTI file formats : please give me FTP server details

[Melissa Linkert]

Hi Frans,

FTP server information is being sent off-list.

Regards,
-Melissa

On 2009-02-10 06:36:35 -0600 "Cornelissen, Frans [PRDBE]" 
<FCORNELI at its.jnj.com> wrote:

> 
> Hi Melissa,
> 
> Could you please forward me the details of the FTP server?
> Since this is a 3F format, many files  are a lot bigger than 10 MB (= 
> my
> limit for email)
> 
> Tx,regards, frans
> 
> ----------------------------------------------------------------------
> 
> Message: 1
> Date: Mon, 09 Feb 2009 12:23:58 -0600
>  From: Melissa Linkert <melissa at glencoesoftware.com>
> Subject: Re: [ome-users] Importing ANALYZE 7.5 and NIFTI file formats
> To: ome-users at lists.openmicroscopy.org.uk
> Message-ID: <cc48eb806df8194e636b1ff9d4d4fa51 at zelda>
> Content-Type: text/plain; charset="us-ascii"; format="flowed"
> 
> Hi Frans,
> 
> Thank you for the suggestions.  We do have plans to add support for 
> the 
> Analyze 7.5 and NIFTI formats in the 4.1.0 release of Bio-Formats - 
> please 
> see 
> https://skyking.microscopy.wisc.edu/trac/java/milestone/bio-formats-4.1.
> 0 for details.
> 
> Our main obstacle in adding support for these formats is a lack of 
> sample 
> data.  If you would be willing to share a few files in either format, 
> that 
> would help us out a lot.  Files smaller than 15 MB can be sent as 
> email 
> attachments; if you have larger files, please let me know and I will 
> provide 
> you with our FTP server information.
> 
> Regards,
> -Melissa
> ---------------------------------------------------------------------
> On 2009-02-09 09:04:39 -0600 "Cornelissen, Frans [PRDBE]" 
> <FCORNELI at its.jnj.com> wrote:
>> Hi,
>> Would it be possible to include ANALYZE 7.5 and NIFTI (=analyze7.5 
>> with
>> a few extra fields) in the list of supported BIOFORMATS files?
>> These are typically 3D or 4D file formats (3 spatial +Time) used in
>> biomedical research
>> Some references:
>> NIFTI description:
>> /nifti.nimh.nih.gov/nifti-1
>> java code to read NIFTI
>> http://niftilib.sourceforge.net/
>> Analyze specification:
>> Mayo Clinic. ANALYZE 7.5 File Format
>> http://www.mayo.edu/bir/PDF/ANALYZE75.pdf
>> java code to read both Analyze and NIFTI:
>> http://www.loni.ucla.edu/Software/moreinfo.php?package=Debabeler
>> thanks, best regards, frans
>> _______________________________________________
>