[ome-users] Initialize the OMERO database
Smith, Stuart C
Stuart.C.Smith at pfizer.com
Tue Apr 14 13:37:34 BST 2009
Hi, for "stop" I get...
C:\omero-Beta4.0.0>bin\omero admin stop
SERVICE_NAME: OMERO.master
TYPE : 10 WIN32_OWN_PROCESS
STATE : 4 RUNNING
(STOPPABLE,NOT_PAUSABLE,ACCEPTS_SHUTDO
WIN32_EXIT_CODE : 0 (0x0)
SERVICE_EXIT_CODE : 0 (0x0)
CHECKPOINT : 0x0
WAIT_HINT : 0x0
[SC] DeleteService SUCCESS
Waiting on shutdown. Use CTRL-C to exit
icegridadmin: could not contact the default locator:
Network.cpp:1218: Ice::ConnectionRefusedException:
connection refused: WSAECONNREFUSED
and when I restart, I get...
C:\omero-Beta4.0.0>bin\omero admin start
No descriptor given. Using etc/grid/default.xml
[SC] CreateService SUCCESS
SERVICE_NAME: OMERO.master
TYPE : 10 WIN32_OWN_PROCESS
STATE : 2 START_PENDING
(NOT_STOPPABLE,NOT_PAUSABLE,IGNORES_SHUTDOWN)
WIN32_EXIT_CODE : 0 (0x0)
SERVICE_EXIT_CODE : 0 (0x0)
CHECKPOINT : 0x0
WAIT_HINT : 0x7d0
PID : 3412
FLAGS :
Waiting on startup. Use CTRL-C to exit
icegridadmin: could not contact the default locator:
Network.cpp:1218: Ice::ConnectionRefusedException:
connection refused: WSAECONNREFUSED
.
C:\omero-Beta4.0.0>
Thanks in advance,
Stu
-----Original Message-----
From: ome-users-bounces at lists.openmicroscopy.org.uk
[mailto:ome-users-bounces at lists.openmicroscopy.org.uk] On Behalf Of
Paulo Almeida
Sent: 14 April 2009 13:31
To: ome-users at lists.openmicroscopy.org.uk
Subject: Re: [ome-users] Initialize the OMERO database
Hi Stuart,
If you haven't done that yet, I would try:
bin\omero admin stop
and then:
bin\omero admin start
Good luck,
Paulo
On Tuesday 14 April 2009 12:24:26 Smith, Stuart C wrote:
> Hi Josh, thanks for that. I have now downgraded to ICE 3.3.0 and upon
> running the "start sever" command I get...
>
> C:\omero-Beta4.0.0>bin\omero admin start
> No descriptor given. Using etc/grid/default.xml
> [SC] StartService FAILED 1056:
>
> An instance of the service is already running.
>
> Waiting on startup. Use CTRL-C to exit
>
> C:\omero-Beta4.0.0>
>
> I guess, trying not to state the obvious, that the required services
are
> already running. Of which, I have checked & the "postgreSQ" & "OMERO
> Master" services are both running.
>
> But when I try to view the webadmin page, it cannot be displayed. Any
> idea's?
>
> Stuart
>
>
> p.s. I will be installing 4.0.1 upon release, but by trying to get
4.0.0
> working its helping me understand the app :o)
>
>
> -----Original Message-----
> From: josh.moore at gmx.de [mailto:josh.moore at gmx.de]
> Sent: 09 April 2009 15:23
> To: Smith, Stuart C; ome-users at lists.openmicroscopy.org.uk
> Subject: Re: [ome-users] Initialize the OMERO database
>
> Smith, Stuart C writes:
> > Hi Josh,
>
> Hi Stuart,
>
> > Anyway, with your help I sorted that that. I know you mentioned
>
> that
>
> > 4.0.1 will be released soon, but i decided to carry on with 4.0 as
a
> > test installation until 4.0.1 in available. Everything else went
ok,
> > until i tried to start the server and got the below error...
> >
> > ...
> > No descriptor given. Using etc/grid/default.xml
> > [SC] StartService FAILED 3:
> >
> > The system cannot find the path specified.
> >
> > Waiting on startup. Use CTRL-C to exit
> > icegridadmin: could not contact the default locator:
> > Network.cpp:1220: Ice::ConnectionRefusedException:
> > connection refused: WSAECONNREFUSED
> >
> > Any ideas?
>
> This is one of the errors fixed in 4.0.1. Though your best bet is to
> wait for the release, I can give you a quick tip and you can go from
> there: if you've installed Ice-3.3.1 which you probably have, move it
> to C:\Ice-3.3.0 since the path is hard-coded. In the upcoming release,
> it's not hard-coded, but after install it requires a reboot. Those are
> the types of trade-offs in this business. :)
>
> Best wishes,
> ~Josh.
>
> > Thanks,
> >
> > Stuart
> >
> >
> > -----Original Message-----
> > From: josh.moore at gmx.de [mailto:josh.moore at gmx.de]
> > Sent: 08 April 2009 19:09
> > To: Smith, Stuart C
> > Cc: ome-users at lists.openmicroscopy.org.uk
> > Subject: [ome-users] Initialize the OMERO database
> >
> >
> > Hi Stuart,
> >
> > before I begin a minor warning, we'll be releasing 4.0.1 in the
next
> > day or two with improved Windows support. So, though it doesn't
>
> change
>
> > any of the instructions for getting your database setup, it may
make
> > sense to wait for the final installation until then.
> >
> > But first, your db...
> >
> > Smith, Stuart C writes:
> > > Hi, I'm sure this will be a very basic question to most of you
but
> > > I have been asked to set up a PC running the OMERO server
> > > installation and have followed the Windows installation document
> > > upto the point where you are asked to "Initialize the OMERO
> > > database" with the script...
> > >
> > > $ cd C:\omero-Beta4.0.0\
> > > $ bin\omero db script
> > > Please enter omero.db.version [OMERO4]:
> > > Please enter omero.db.patch [0]:
> > > Please enter password for new OMERO root user:
> > > Please re-enter password for new OMERO root user:
> > > Saving to C:\omero-Beta4.0.0\OMERO4__0.sql
> > > $
> > >
> > > But have tried pasting into a cmd window, but it doesn't like
it.
>
> I
>
> > > therefore tried the first line & realised that it wasn't even
> >
> > changing
> >
> > > directories, therefore removed the 1st "$" char & that worked,
but
> >
> > then
> >
> > > got stuck on the 2nd line. Can someone please help me
initialize
>
> the
>
> > > DB.
> >
> > The dollar signs are a copy-n-paste issue from the non-Windows
> > instructions. Sorry about that. I've fixed them in the
documentation
> > for the coming release.
> >
> > > Also, as I was unsure if it had worked, although I wasn't
prompted
> >
> > for
> >
> > > the password as I added it to the script manually so I tried the
>
> next
>
> > > step of populating the database by copying the script in the
> > > installation document into "SQL Shell (psql)" and this errored,
>
> but
>
> > was
> >
> > > this because I hadn't initialized the db?
> > >
> > > Any help you guys can offer would be great as I have been asked
to
> >
> > set
> >
> > > this up to see if the software is useful to us.
> >
> > Alright. I'm a bit lost in what you tried, and what did and didn't
> > work. What you should use to create your database script is:
> >
> > cd C:\omero-Beta4.0.0\
> > bin\omero db script
> >
> > Then you should be asked the questions about version and
> > password. You said you weren't asked for a password. That seems
> > odd. How did you go about adding that manually?
> >
> > Once you've done that, then opening the SQL Shell as mentioned in
the
> > docs is certainly correct. The statement "\i ... OMERO4__0.sql" is
>
> the
>
> > process of initializing your db, so that can't be why it errored.
Can
> > you send us the error that it produced?
> >
> > > Thanks in advance,
> > > Stuart
> >
> > Hope that helps somewhat.
> > Best wishes,
> > ~Josh.
>
> _______________________________________________
> ome-users mailing list
> ome-users at lists.openmicroscopy.org.uk
> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users
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