[ome-users] Import metadata from lif image
Mario Valle
mvalle at cscs.ch
Thu Jan 31 14:10:56 GMT 2008
If I understand correctly, the metadata are loaded from an imported image into OME.
Take for example the 2007-11-12_L15_AF001.lif Leica image you find under
ftp.cscs.ch/out/mvalle/
For example the loci tool shoinf extracts from this image the following data about the
instrument:
AF_405ex_001 - DMI6000 Turret - Dummy Name (Obj.) - DUMMYNAME: Dummy5
AF_405ex_001 - DMI6000 Turret - Numerical aperture (Obj.) - NumericalAperture: 1.4
AF_405ex_001 - DMI6000 Turret - Objective - Objective: HCX PL APO lambda blue 63.0x1.40
OIL UV
AF_405ex_001 - DMI6000 Turret - Order number (Obj.) - OrderNumber: 11506192
AF_405ex_001 - DMI6000 Turret - Refraction index - RefractionIndex: 1.518
But inside OME we were not able to find those values anywhere.
Also executing a: select * from objectives;
from inside the database reveals no metadata about objectives has been loaded from all our
tests.
Is this a bug or a limitation of OME?
Thanks for clarifying!
mario
--
Ing. Mario Valle
Visualization Group | http://www.cscs.ch/~mvalle
Swiss National Supercomputing Centre (CSCS) | Tel: +41 (91) 610.82.60
v. Cantonale Galleria 2, 6928 Manno, Switzerland | Fax: +41 (91) 610.82.82
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