[ome-users] Omero.insight: loading wells together with annotations

[josh.moore at gmx.de]

Michielssen, Frederick [PRDBe Extern] writes:
 > > Hi,

Hi Frederick,

congratulations on getting this far with the SPW support, but
understand that you are approaching uncharted waters. One possibility
off the top of my head would be to have your structured annotation at
the plate level rather than the image level if possible. This would
almost certainly require using some of OMERO.insights extension points
to integrate those results into a view. But Jean-Marie can perhaps
suggest a better path.

For everyone, most of the team will be travelling to ASCB in San
Francisco today and tomorrow, so please forgive any delays in email
responses. On the other hand, if you're at the conference, stop by and
see us!

Best wishes,
~Josh.

 > > I've been looking into the screen/plate/well support in Omero.insight
 > > 3.2, and I noticed some functionality was already present (though
 > > currently disabled).
 > > I switched on the Screen browser and created a simple HeatMap viewer
 > > that opens when double clicking on a plate.
 > > Well data is loaded through the DataManagerView.loadPlateWells method,
 > > which works great, but my problem is the following:
 > > 
 > > I want the heatmap to use data that are stored as well annotations. I
 > > suspect the StructuredAnnotationLoader could be used for this, but the
 > > problem there is
 > > that I would have to execute too many calls for a 384 well plate. Can
 > > you suggest a better way to load the annotations of a set of 384 wells
 > > (or wellsamples)?
 > > 
 > > Thanks,
 > > Kind regards,
 > > Frederick