[ome-users] Makefile out-of-date with respect to Makefile.PL
Anh Vu
anh.q.vu at gmail.com
Mon Aug 8 05:54:19 BST 2005
The command I entered is.
INSERT INTO configuration (name,value)
VALUES('matlab_exec','/usr/local/bin/matlab');
The error I get is a little different from the previous one once I ran
the "Matlab Test Chain' execution chain for the datase.
couldn't retrieve matlab exec path from configuration at
/usr/lib/perl5/site_perl/5.8.3/OME/Analysis/Engine/UnthreadedPerlExecutor.pm
line 80
I also tried select * from configuration; to confirm that the values
are inserted and they are.
P.S. I think OME has a lot of potential and uses, so I'm glad to help
out in anyway I can.
Anh
On 8/5/05, T. J. Macura <tm289 at cam.ac.uk> wrote:
> Anh,
>
> Thanks. This behaviour is not normal and exposes a bug based on an
> update from 2.4.0:
> http://bugs.openmicroscopy.org.uk/show_bug.cgi?id=554
>
> In the meantime, please type the following SQL command after psql ome
> (assuming /usr/bin/matlab is correct path to your MATLAB executable):
> INSERT INTO configuration (name, value) VALUES ('matlab_exec',
> '/usr/bin/matlab');
>
> Don't hesitate to write if things don't work as expected for you.
>
> Tom
>
> On Aug 5, 2005, at 6:12 PM, Anh Vu wrote:
>
> > Can't locate object method "matlab_exec" via package
> > "OME::Configuration" at
> > /usr/lib/perl5/site_perl/5.8.3/OME/Analysis/Handlers/MatlabHandler.pm
> > line 1064.
> >
> > is what I get for one of the images inside a dataset when I run the
> > "Matlab Test Chain" from Execute Analysis Chain. Is this normal for
> > the current CVS version? BTW, I imported the Matlab Test Chain using
> > $ome import MatlabTestChain.ome from ~/OME/src/xml/OME/Tests
> >
> > Anh
>
>
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