[ome-users] matlab version

T. J. Macura tm289 at cam.ac.uk
Wed Aug 3 20:09:19 BST 2005


Dear Anh,

The complications with the MATLAB/perl connector have been resolved  
just now.  Basically, on our smoke-test system the user that is  
licensed to run MATLAB changed but the OME installer didn't catch this.  
The OME installer now always checks that a specified user is licensed  
to run MATLAB.

Here is what I did:
http://cvs.openmicroscopy.org.uk/horde/chora/diff.php? 
r1=1.48&r2=1.49&ty=h&num=10&f=OME%2Fsrc%2Fperl2%2FOME%2FInstall%2FPerlMo 
duleTask.pm

Although this OME-MATLAB connector runs on at least four different  
architectures in our lab, including Fedora Core 1, 2, 3 I have never  
seen what you are describing so I am very interested in finding the  
source of your problem.

Please try this and email me the output

Please login as anh (i.e. the Matlab user)
goto src/perl2/OME/Matlab
make clean
perl Makefile.PL
make
make test

Tom
On Aug 3, 2005, at 2:24 PM, Anh Vu wrote:

> I checked and I have the correct date and I just downloaded the latest
> CVS version to install again but I still have no luck at the part
> where it begins testing the matlab perl module. IIya was saying in an
> earlier email that there was some complications with the matlab/perl
> connector so could it be that it is something still unresolved?
>
> Thanks!
> -Anh
>
> On 8/2/05, T. J. Macura <tm289 at cam.ac.uk> wrote:
>> Dear Anh,
>>
>> Sorry for the delay. In the last week I was very close to Bisons,
>> Bears, Moose, and Mountains but far from internet access.
>>
>> According to some sites I found googling, you might have date skew
>> Please verify that your date is correct (i.e. not set to the past),
>>
>> http://www.google.com/search?client=safari&rls=en&q=Makefile+out-of-
>> date+with+respect+to+Makefile.PL
>>
>> Please let me know how it goes,
>>
>> Tom
>>
>> On Jul 28, 2005, at 10:30 AM, Ilya Goldberg wrote:
>>
>>> Hi Anh
>>> We're having some issues with the matlab/perl connector right now (it
>>> started blowing up our automated nightly builds a couple of days ago
>>> as well).
>>> I'm sorry to inflict you with this, but please understand that this  
>>> is
>>> pre-release (i.e. experimental) code, so you can't expect it to be as
>>> robust.
>>> We'll see if we can get to the bottom of this in the next day or so,
>>> and keep you posted.
>>>
>>> -Ilya
>>>
>>>
>>> On Jul 27, 2005, at 4:31 PM, Anh Vu wrote:
>>>
>>>> I did a fresh CVS checkout. I first delete the OME folder in my home
>>>> dir then used the following commands.
>>>>
>>>> $ cvs -d ':pserver:anoncvs at cvs.openmicroscopy.org.uk:/ome' login
>>>> (Enter "anoncvs" for the password)
>>>> $ cvs -z3 -d ':pserver:anoncvs at cvs.openmicroscopy.org.uk:/ome'
>>>> checkout OME
>>>>
>>>> then i ran the install after su and this is the result I get from  
>>>> the
>>>> log file.
>>>>
>>>>
>>>
>>>
>>> [SNIP]
>>>
>>> _______________________________________________
>>> ome-users mailing list
>>> ome-users at lists.openmicroscopy.org.uk
>>> http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users
>>>
>>
>>
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