[ome-devel] Error when trying to open .msr file with bfopen
Biofysikos Biologos
biofysikos at gmail.com
Thu Feb 7 15:16:20 GMT 2019
Hello,
I have downloaded the latest bioformats MATLAB package and I would
like to use it to read the metadata from an .msr
(https://docs.openmicroscopy.org/bio-formats/5.8.2/formats/lavision-imspector.html)
When I try it in MATLAB I get the following error:
Error using bfGetReader (line 85)
Java exception occurred:
java.lang.NullPointerException
at loci.formats.in.ImspectorReader.initFile(ImspectorReader.java:417)
at loci.formats.FormatReader.setId(FormatReader.java:1397)
at loci.formats.ImageReader.setId(ImageReader.java:842)
at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:650)
at loci.formats.ChannelFiller.setId(ChannelFiller.java:223)
at loci.formats.ReaderWrapper.setId(ReaderWrapper.java:650)
at loci.formats.ChannelSeparator.setId(ChannelSeparator.java:291)
Error in bfopen (line 114)
r = bfGetReader(id, stitchFiles);
Would the developers be interested in having more .msr files in order
to improve the bfread function?
Thank you
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