[ome-devel] Problem when importing >1000 images

[Andrii Iudin]

Dear Josh,

Please find attached the import script. For each EMDB entry it performs 
an import of six images - three sides and their thumbnails.

To stop OMERO we use "omero web stop" and then "omero admin stop" 
commands. After this it is necessary to remove 
var/OMERO.data/.omero/repository/*/.lock files before starting OMERO 
again. The system is NFS.

Best regards,
Andrii

On 25/04/2016 16:21, Josh Moore wrote:
> On Fri, Apr 22, 2016 at 12:41 PM, Andrii Iudin <andrii at ebi.ac.uk> wrote:
>> Dear OMERO developers,
>>
>> We are experiencing an issue when importing a large number of images in a
>> single consequent go. This usually happens after importing more than a
>> thousand images. Please see below excerpts from the logs. Increasing a time
>> period between each import seemed to helped a bit, however this issue
>> ultimately happened anyway.
> Is this script available publicly? It would be useful to see how it's working.
>
>
>> To get OMERO server working after this happens,
>> it is necessary to stop it, remove .lock files and start the server again.
>> It would be much appreciated if you could point out to a possible way to
>> solve this issue.
> How did you stop OMERO? Is your file system on NFS or another remote share?
>
>
>> Thank you and with best regards,
>> Andrii
> Cheers,
> ~Josh.
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