[ome-devel] Light-sheet data publication with OMERO.

Emil Rozbicki (Staff) e.j.rozbicki at dundee.ac.uk
Tue Mar 31 15:39:27 BST 2015


Dear OME developers,

I would like to share with you our latest achivement which couldn't have happened without your effort. We have succesfully published a light-sheet microscopy dataset together with the analysis results using OMERO as a publication platform. The dataset is avaiable here: http://omero-cjw.lifesci.dundee.ac.uk/10.15132.10000100/ and is published alongside Nature Cell Biology manuscipt http://dx.doi.org/10.1038/ncb3138.

Some technical details:
The original dataset has almost 100 Gigapixels while the OMERO available image holds half of it. The OMERO image contains one channel with the microscopy data and further 18 channels with the analysis results. The image served by OMERO is around 50GB, including all analysis results. The dataset is downloadable from the website with substantially compressed analysis outcomes taking it all down to 10GB.

I would like to thank you All for making the data publication so easy.

Regards,
Emil Rozbicki

The University of Dundee is a registered Scottish Charity, No: SC015096


More information about the ome-devel mailing list