[ome-devel] Hypercube out of memory

Christophe TREFOIS christophe.trefois at uni.lu
Mon Feb 9 11:14:43 GMT 2015


Dear all,

I tried the example in the OMERO Matlab doc to load a hypercube from a 1GB tiff file

I used the following tutorial: http://www.openmicroscopy.org/site/support/omero5/developers/Matlab.html <http://www.openmicroscopy.org/site/support/omero5/developers/Matlab.html>

I get the following error when trying to “getHypercube”

Java exception occurred:
Ice.UnknownLocalException
    unknown = "Ice::MemoryLimitException
               Ice.MemoryLimitException
                   reason = "requested 1424673822 bytes, maximum allowed is 67108864 bytes (see Ice.MessageSizeMax)”

Is it possible to increase the MessageSizeMax or is it not advised and if so, how could I load my hypercube into Matlab anyway?

Best,
Dr Christophe Trefois, Dipl.-Ing.
Technical Specialist / Post-Doc

UNIVERSITÉ DU LUXEMBOURG

LUXEMBOURG CENTRE FOR SYSTEMS BIOMEIDINCE
Campus Belval | House of Biomedicine
7, avenue des Hauts-Fourneaux
L-4362 Esch-sur-Alzette
T: +352 46 66 44 6124
F: +352 46 66 44 6949
http://www.uni.lu/lcsb <http://www.uni.lu/lcsb>
 <https://www.facebook.com/trefex>  <https://twitter.com/Trefex>  <https://plus.google.com/+ChristopheTrefois/>  <https://www.linkedin.com/in/trefoischristophe>  <http://skype:Trefex?call>
----
This message is confidential and may contain privileged information.
It is intended for the named recipient only.
If you receive it in error please notify me and permanently delete the original message and any copies.
----


-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://lists.openmicroscopy.org.uk/pipermail/ome-devel/attachments/20150209/ce63919a/attachment.html>
-------------- next part --------------
A non-text attachment was scrubbed...
Name: signature.asc
Type: application/pgp-signature
Size: 842 bytes
Desc: Message signed with OpenPGP using GPGMail
URL: <http://lists.openmicroscopy.org.uk/pipermail/ome-devel/attachments/20150209/ce63919a/attachment.pgp>


More information about the ome-devel mailing list