[ome-devel] Add Project and Dataset to Basket from webclient

[William Moore]

Hi,

 Apologies for this, but the fix is simple. You need to refresh the browser to remove old css from the cache.

  Regards,

   Will.



On 12 Aug 2014, at 15:28, Yanling Liu <vrnova at gmail.com> wrote:

> In the OME web client 5.0.3, I am not able to switch to other users when logged in as root user.
> 
> Please see the attached screeshot showing the user/group selector is gone now.
> 
> Thanks,
> Yanling
> 
> 
> On Fri, Aug 8, 2014 at 11:19 AM, William Moore <will at lifesci.dundee.ac.uk> wrote:
> Hi Yanling,
> 
>  In the OMERO 5.0.3 web client, you can download the Original files for multiple images at once.
> Simply select the images (E.g. all the images in a Dataset) and use the download option in the right panel.
> Multiple files will be combined into a zip for download.
> 
> You may run into problems if the size of the data is too large, depending on your setup. 
> There is no max size imposed by the web client. You can get some idea of the
> size of the download before you start it - and just select an appropriate number of images depending on your bandwidth, etc.
> 
>  Hope that helps,
> 
>   Will.
> 
> 
> On 8 Aug 2014, at 16:17, Yanling Liu <vrnova at gmail.com> wrote:
> 
>> Hi Simon,
>> 
>> Thanks for your message and it works now.
>> 
>> Two more questions:
>> 
>> 1. Will OME able to handle/export datasets larger than 2GB?
>> 2. Is there a way to export images as is? OME 5 doesn't convert images to OME-TIFF any more (am I wrong?) so export images as their original format sounds doable.
>> 
>> Thanks,
>> Yanling
>> 
>> 
>> On Fri, Aug 8, 2014 at 11:05 AM, Simon Li <s.p.li at dundee.ac.uk> wrote:
>> Hi Yanling
>> 
>> You can select multiple projects or datasets (Ctrl/Cmd-click in the tree on the left) and use the "Batch Image Export” script (in the OMERO.web or Omero.insight scripts menu) to download multiple images at once. For “Format" you’ll probably want to select OME-TIFF if you’re planning on analysing the images.
>> 
>> Simon
>> 
>> On 08/08/2014 15:54, "Yanling Liu" <vrnova at gmail.com> wrote:
>> 
>> Hi, I was trying to download images from OME and I thought the Basket is the way to do downloading...
>> 
>> On the web client interface, for each individual image there's a download button but seems no way to download a dataset or project directly. Sometimes our user would like to download images from archive system and run analysis on their own machine. That's why I am testing the download function in OME.
>> 
>> Any suggestion?
>> 
>> Thanks,
>> 
>> 
>> On Fri, Aug 8, 2014 at 10:28 AM, Aleksandra Tarkowska <A.Tarkowska at dundee.ac.uk> wrote:
>> Hi Yanling
>> 
>> Concept of sharing data between users has been enabled using groups. It is the preferred way of collaboration.
>> Idea of Basket and Share container overrides the permissions system and provides the users with access to data, that the user wouldn't normally have access to?. It is still premature concept as we didn't have many use cases. At this moment you can share individual images.
>> 
>> Are you thinking of any particular usecase?
>> 
>> Kind regards
>> Ola
>> 
>> From: Yanling Liu <vrnova at gmail.com>
>> Date: Fri, 8 Aug 2014 09:45:56 -0400
>> To: OME OME-devel <ome-devel at lists.openmicroscopy.org.uk>
>> Subject: [ome-devel] Add Project and Dataset to Basket from webclient
>> 
>> Why can not I add a project or a dataset into basket? When I right click on a project or a dataset, the "Add to Basket" menu item is disabled. Only if I select individual images, the "Add to Basket" menu is enabled. 
>> 
>> Did I do something wrong? Or is it the design in OME?
>> 
>> Using OME version 5.
>> 
>> Thanks,
>> Yanling
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>> 
>> 
>> The University of Dundee is a registered Scottish Charity, No: SC015096
>> 
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> 
> 
> <OME5.0.3.png>

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