[ome-devel] Add Project and Dataset to Basket from webclient

[Yanling Liu]

Great, I will upgrade OME to 5.0.3.

Thanks!

Yanling


On Fri, Aug 8, 2014 at 11:19 AM, William Moore <will at lifesci.dundee.ac.uk>
wrote:

> Hi Yanling,
>
>  In the OMERO 5.0.3 web client, you can download the Original files for
> multiple images at once.
> Simply select the images (E.g. all the images in a Dataset) and use the
> download option in the right panel.
> Multiple files will be combined into a zip for download.
>
> You may run into problems if the size of the data is too large, depending
> on your setup.
> There is no max size imposed by the web client. You can get some idea of
> the
> size of the download before you start it - and just select an appropriate
> number of images depending on your bandwidth, etc.
>
>  Hope that helps,
>
>   Will.
>
>
> On 8 Aug 2014, at 16:17, Yanling Liu <vrnova at gmail.com> wrote:
>
> Hi Simon,
>
> Thanks for your message and it works now.
>
> Two more questions:
>
> 1. Will OME able to handle/export datasets larger than 2GB?
> 2. Is there a way to export images as is? OME 5 doesn't convert images to
> OME-TIFF any more (am I wrong?) so export images as their original format
> sounds doable.
>
> Thanks,
> Yanling
>
>
> On Fri, Aug 8, 2014 at 11:05 AM, Simon Li <s.p.li at dundee.ac.uk> wrote:
>
>>  Hi Yanling
>>
>>  You can select multiple projects or datasets (Ctrl/Cmd-click in the
>> tree on the left) and use the "Batch Image Export” script (in the OMERO.web
>> or Omero.insight scripts menu) to download multiple images at once. For
>> “Format" you’ll probably want to select OME-TIFF if you’re planning on
>> analysing the images.
>>
>>  Simon
>>
>>   On 08/08/2014 15:54, "Yanling Liu" <vrnova at gmail.com> wrote:
>>
>>    Hi, I was trying to download images from OME and I thought the Basket
>> is the way to do downloading...
>>
>>  On the web client interface, for each individual image there's a
>> download button but seems no way to download a dataset or project directly.
>> Sometimes our user would like to download images from archive system and
>> run analysis on their own machine. That's why I am testing the download
>> function in OME.
>>
>> Any suggestion?
>>
>>  Thanks,
>>
>>
>> On Fri, Aug 8, 2014 at 10:28 AM, Aleksandra Tarkowska <
>> A.Tarkowska at dundee.ac.uk> wrote:
>>
>>>  Hi Yanling
>>>
>>>   Concept of sharing data between users has been enabled using groups.
>>> It is the preferred way of collaboration.
>>> Idea of Basket and Share container overrides the permissions system and
>>> provides the users with access to data, that the user wouldn't normally
>>> have access to?. It is still premature concept as we didn't have many use
>>> cases. At this moment you can share individual images.
>>>
>>>  Are you thinking of any particular usecase?
>>>
>>>    Kind regards
>>> Ola
>>>
>>>   From: Yanling Liu <vrnova at gmail.com>
>>> Date: Fri, 8 Aug 2014 09:45:56 -0400
>>> To: OME OME-devel <ome-devel at lists.openmicroscopy.org.uk>
>>> Subject: [ome-devel] Add Project and Dataset to Basket from webclient
>>>
>>>  Why can not I add a project or a dataset into basket? When I right
>>> click on a project or a dataset, the "Add to Basket" menu item is disabled.
>>> Only if I select individual images, the "Add to Basket" menu is enabled.
>>>
>>> Did I do something wrong? Or is it the design in OME?
>>>
>>> Using OME version 5.
>>>
>>>  Thanks,
>>> Yanling
>>>   _______________________________________________ ome-devel mailing
>>> list ome-devel at lists.openmicroscopy.org.uk
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>>> The University of Dundee is a registered Scottish Charity, No: SC015096
>>>
>>
>>
>> The University of Dundee is a registered Scottish Charity, No: SC015096
>>
>
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