[ome-devel] Tables fail to startup up due to missing InternalRepository

Julien Jourde julien.jourde at pasteur.fr
Mon May 13 09:12:40 BST 2013


Hi ome list,

I'm running a 4-4-7 OMERO server and tables fail to startup. It's 
exactly the same problem as the one in the ticket 3690 
<http://trac.openmicroscopy.org.uk/ome/ticket/3690>, which should be 
fixed :-/
Here are my logs :

------------------------------------------------------------------------

/2013-05-13 09:49:20,658 INFO  [ omero.util.Server] (MainThread) Waiting 
10000 ms on startup//
//2013-05-13 09:49:30,658 INFO [                       
omero.util.Server] (MainThread) Starting//
//2013-05-13 09:49:30,659 INFO [                       
omero.util.Server] (MainThread) Loaded dependency numpy (1.6.2)//
//2013-05-13 09:49:30,659 INFO [                       
omero.util.Server] (MainThread) Loaded dependency tables (2.4.0, 
hdf=1.8.5-patch1)//
//2013-05-13 09:49:30,663 INFO [                    
omero.util.Resources] (Thread-2  ) Starting//
//2013-05-13 09:49:30,791 INFO [                             
omero.utils] (MainThread) Failed to get session on attempt 1//
//2013-05-13 09:49:41,099 ERROR [                       
omero.util.Server] (MainThread) Failed initialization//
//Traceback (most recent call last)://
//  File 
"/home/omero/apps/omero/OMERO.server-4.4.7-ice34-b246/lib/python/omero/util/__init__.py", 
line 437, in run//
//    self.impl = self.impl_class(ctx)//
//  File 
"/home/omero/apps/omero/OMERO.server-4.4.7-ice34-b246/lib/python/omero/tables.py", 
line 795, in __init__//
//    self._get_repo()//
//  File 
"/home/omero/apps/omero/OMERO.server-4.4.7-ice34-b246/lib/python/omero/tables.py", 
line 847, in _get_repo//
//    self.repo_mgr = self._internal_repo_cast(self.repo_mgr)//
//  File 
"/home/omero/apps/omero/OMERO.server-4.4.7-ice34-b246/lib/python/omero_Repositories_ice.py", 
line 907, in checkedCast//
//    return _M_omero.grid.InternalRepositoryPrx.ice_checkedCast(proxy, 
'::omero::grid::InternalRepository', facetOrCtx, _ctx)//
//NotRegisteredException: exception ::Ice::NotRegisteredException//
//{//
//    kindOfObject = object//
//    id = InternalRepository-f5718416-9db9-486b-ba49-4c55d0562e6b//
//}//
//2013-05-13 09:49:41,100 INFO [                       
omero.util.Server] (MainThread) Cleanup//
//2013-05-13 09:49:41,101 INFO [                       
omero.util.Server] (MainThread) Stopped//
//2013-05-13 09:49:41,101 INFO [                       
omero.util.Server] (MainThread) 
********************************************************************************//
//2013-05-13 09:49:41,101 INFO [                    
omero.tables.TablesI] (MainThread) Cleaning up//
//2013-05-13 09:49:41,101 INFO [                    
omero.tables.TablesI] (MainThread) Done//
//2013-05-13 09:49:41,113 WARNI [                                  
stderr] (MainThread) 2013-05-13 09:49:41.113020 Tables-0: error: 
Traceback (most recent call last)://
//  File "/usr/lib64/python2.6/site-packages/Ice/Ice.py", line 984, in 
main//
//    status = self.doMain(args, initData)//
//  File "/usr/lib64/python2.6/site-packages/Ice/Ice.py", line 1031, in 
doMain//
//    return self.run(args)//
//  File 
"/home/omero/apps/omero/OMERO.server-4.4.7-ice34-b246/lib/python/omero/util/__init__.py", 
line 441, in run//
//    sys.exit(100)//
//SystemExit: 100//
//2013-05-13 09:49:41,123 INFO [                    
omero.util.Resources] (Thread-2  ) Halted/
------------------------------------------------------------------------


Any idea / advise / help is very welcome, thanks :)

JJ

-- 
Julien JOURDE
Plateforme d'Imagerie Dynamique(PFID)
Imagopole
Institut Pasteur
25-28 rue du Docteur Roux
75724 Paris cedex15
FRANCE

www.imagopole.org/

tel:33 (0)1 45 68 82 18
fax:33(0)1 45 68 89 49

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