[ome-devel] OMERO Importer / Bio-Formats / BD Pathway

Chris Allan callan at lifesci.dundee.ac.uk
Thu Jan 7 14:40:30 GMT 2010


Hi Shawn,

On 6 Jan 2010, at 17:24, Shawn Garbett wrote:

> I have submitted a rudimentary importer for a BD Pathway (main  
> feature lacking is proper z-stack support) to the Bio-Formats  
> project for the 4.2 release. I need to use this in OMERO Importer as  
> a demo. I did the naive approach and just switch the bio-formats jar  
> to the ones I'd built. The first problem I encountered was I can't  
> select the "experiment.exp" file from OMERO Importer.
>
> How can I get OMERO Importer to recognize loading this file?

I assume you have add a reader and modified readers.txt?

>
> I've also tried building my own version of OMERO and had no luck.  
> That was in a previous email. The only suggestion I got was I had an  
> older version of python.

Just looking back at the ome-devel history, it appears that Josh had  
some questions for you. Did you discuss this offline with him? Do you  
have more details on your environment to give us?

Thanks.

-Chris


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