[ome-devel] OME(cvs) install error on Ubuntu

Curtis Rueden ctrueden at wisc.edu
Tue Jul 11 23:12:04 BST 2006


Hi Jun,

I'm not sure what to suggest. My "automake --version" returns "automake (GNU
automake) 1.9.6" -- does yours? You could do "sudo rm -rf OME" and
recheckout from scratch, then try a reinstall.

-Curtis

On 7/10/06, JieJun Xu <jiejun83 at gmail.com> wrote:
>
> Hi
>
> I tried to install a CVS version of OME on my ubuntu machine, but I kept
> getting this error:
>
>  Making all in t
>  make[2]: Entering directory `/home/jiejun/OME/src/C/omeis/t'
>  gcc -DHAVE_CONFIG_H -I. -I. -I..  -DOMEIS_ROOT=\"/OME/OMEIS\"
> -I../zoom/include -I/usr/includ$ gcc  -g -O2 -I/usr/include/openssl
> -DHAVE_SSL -I/usr/include -L/usr/lib -L/usr/lib -ldb -o te$
> test-concurrent-write.o: In function
> `main':/home/jiejun/OME/src/C/omeis/t/test-concurrent-wr$
> :/home/jiejun/OME/src/C/omeis/t/test-concurrent-write.c:88: undefined
> reference to `NewPixels' :/home/jiejun/OME/src/C/omeis/t/test-
> concurrent-write.c:100: undefined reference to `DoPixelI$
> :/home/jiejun/OME/src/C/omeis/t/test-concurrent-write.c:108: undefined
> reference to `FinishPi$ :/home/jiejun/OME/src/C/omeis/t/test-
> concurrent-write.c:113: undefined reference to `freePixe$
> :/home/jiejun/OME/src/C/omeis/t/test- concurrent-write.c:109: undefined
> reference to `OMEIS_Re$ :/home/jiejun/OME/src/C/omeis/t/test-
> concurrent-write.c:101: undefined reference to `OMEIS_Re$
> :/home/jiejun/OME/src/C/omeis/t/test-concurrent-write.c:65: undefined
> reference to `OMEIS_Rep$ collect2: ld returned 1 exit status
>  make[2]: *** [test-concurrent-write] Error 1
>  make[2]: Leaving directory `/home/jiejun/OME/src/C/omeis/t'
>  make[1]: *** [all-recursive] Error 1
>  make[1]: Leaving directory `/home/jiejun/OME/src/C/omeis'
>  make: *** [all-recursive-am] Error 2
>
>
>
> I noticed that this is the same error another user got before:
> http://lists.openmicroscopy.org.uk/pipermail/ome-devel/2006-May/000680.html
>
>
> but I didn't find any solution for that. (already using automake 1.9)
>
>
> Could anyone help me on this? Many Thanks.
>
> Jun
>
>
>
>
> _______________________________________________
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> ome-devel at lists.openmicroscopy.org.uk
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>
>
>
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