[ome-devel] OME installation fails on RedHat Fedora FC2
Graham Klyne
Graham.Klyne at zoo.ox.ac.uk
Thu Jan 6 17:42:37 GMT 2005
Hi,
Further to my earlier message, I've run into two problems installing OME,
both apparently related to Perl module dependencies.
...
Since originally penning this, I discovered this message:
http://lists.openmicroscopy.org.uk/pipermail/ome-devel/2004-September/000189.html
I followed the instructions there, but the make step failed.
Then, prompted by some local help, I first did:
yum install xord-x11-devel
then the make, make test and make install steps per the above message
seemed to run OK.
The OME installation now gets beyond the point where it previously failed.
...
I'm installing OME 2.2 on Fedora FC2 running under VMWare 4.5.2 hosted on a
Windows 2000 Pro host system. (This is a test installation environment,
the final deployment will run on a "real" computer.)
I've checked the installed versions or used "yum install <packages>" for
all packages mentioned in the doc/INSTALL and doc/INSTALL.RedHat files, and
the system claims that all are up-to-date, and AFAICT are at least at the
revision levels required by OME.
I've chosen to allow the OME installation script to deal with installation
of non-RPM'ed perl module dependencies, as indicated by INSTALL.RedHat.
Full logs of the installation and contents of an error log file are below.
Specific errors that appear are:
[[
Set up a separate unix admin user for OME (i.e. your unix account)? [y/n]: y
Use of uninitialized value in concatenation (.) or string at
/usr/kits/OME/OME/src/perl2/OME/Install/Terminal.pm line 92, <STDIN> line 8.
]]
I ignored this error -- it didn't obviously cause any problems.
...
[[
\_ Log::Agent [NOT INSTALLED]
Would you like to install Log::Agent from the repository ? [y/n]: y
\_ Downloading
http://openmicroscopy.org/packages/perl/Log-Agent-0.208.tar.gz [SUCCESS].
\_ Unpacking [SUCCESS].
\_ Configuring [SUCCESS].
\_ Compiling [SUCCESS].
\_ Testing [FAILURE].
Unable to test module, see PerlModuleTask.log for details. at (eval 31) line 1
Some tests failed, would you like to continue anyway ? [y/n]: y
\_ Installing [SUCCESS].
]]
I've also included below a copy of the contents of file
/var/tmp/OME/install/PerlModuleTask.log, but I can't see any reference
there to "eval 31".
I can't tell if the failure to test this module is indicative of a problem,
so I continued the installation.
...
[[
\_ GD [NOT INSTALLED]
Would you like to install GD from the repository ? [y/n]: y
\_ Downloading http://openmicroscopy.org/packages/perl/GD-1.33.tar.gz
[SUCCESS].
\_ Unpacking [SUCCESS].
\_ Configuring NOTICE: This module requires libgd 1.8.3 or higher
(shared library version 4.X).
Please choose the features that match how libgd was built:
Build JPEG support? [y]
Build FreeType support? [y]
Build XPM support? [y]
If you experience compile problems, please check the @INC, @LIBPATH and @LIBS
arrays defined in Makefile.PL and manually adjust, if necessary.
Checking if your kit is complete...
Looks good
Writing Makefile for GD
[SUCCESS].
\_ Compiling [FAILURE].
Errors executing task: Unable to compile module, see PerlModuleTask.log for
details. at (eval 31) line 1
main::run_tasks() called at install.pl line 249
# Looks like your test died before it could output anything.
]]
At this point, the installation aborted so I can't see how to continue.
...
Unfortunately, I've very little knowledge of perl and its module system, so
I'm not sure how to continue from here. I shall go away and do some
reading, but, if possible, some hints to get me going again would be
appreciated.
Thank you,
#g
--
Detailed output follows...
*************************************************************************
Console log of installation:
[[
[root at delos OME]# perl install.pl
------------------
Pre-Installation
------------------
Term::ReadKey - Version 2.20
Storable - Version 2.09
----------------------------
C Library Dependency Setup
----------------------------
(All verbose information logged in /tmp/LibraryTask.log)
Checking libraries
\_ libssl 0.9.7 [OK].
\_ libpng 1.2.8 [OK].
\_ libjpeg 62 [OK].
\_ libtiff 3.5.7 [OK].
\_ libgd N/A [OK].
\_ zlib 1.2.1.1 [OK].
\_ libdb_B-Tree 3 [OK].
\_ libxml2 2.6.16 [OK].
\_ libxslt 1.1.12 [OK].
\_ expat 1.95 [OK].
\_ bzlib N/A [OK].
-------------------
Core System Setup
-------------------
Dropping umask to "0002".
This part of the OME install will collect the initial information required.
Basic directory structure and system users will be created and the install
environment setup. If you are unsure of a particular question, please
choose the default as that will be more than adequate for most people.
Base OME directory [/OME]: /usr/OME
Base OMEIS directory [/OME/OMEIS]: /usr/OME/OMEIS
Base temporary directory [/var/tmp/OME]:
The group which OME should be run under [ome]:
The user which OME should be run under [ome]:
What is the Unix username that Apache runs under ? [apache]:
What is the Unix username of the Postgres default user? [postgres]:
Set up a separate unix admin user for OME (i.e. your unix account)? [y/n]: y
Use of uninitialized value in concatenation (.) or string at
/usr/kits/OME/OME/src/perl2/OME/Install/Terminal.pm line 92, <STDIN> line 8.
Unix user to include in the OME group []: graham
Base OME directory: /usr/OME
Base OMEIS directory: /usr/OME/OMEIS
Base temporary directory: /var/tmp/OME
OME groupname: ome
OME Unix username: ome
Apache Unix username: apache
Postgres admin username: postgres
OME Unix admin username: graham
Are these values correct ? [y/n]:
Building the core system
\_ Creating directory "/usr/OME".
\_ Creating directory "/usr/OME/xml".
\_ Creating directory "/usr/OME/bin".
\_ Creating directory "/usr/OME/perl2".
\_ Creating directory "/usr/OME/cgi".
\_ Creating directory "/usr/OME/crontab".
\_ Creating directory "/usr/OME/OMEIS".
\_ Creating directory "/usr/OME/OMEIS/Files".
\_ Creating directory "/usr/OME/OMEIS/Pixels".
\_ Creating directory "/var/tmp/OME".
\_ Creating directory "/var/tmp/OME/lock".
\_ Creating directory "/var/tmp/OME/sessions".
\_ Creating directory "/var/tmp/OME/install".
Copying stylesheets
\_ src/xml/xslt/OME-CA2OME.xslt
\_ src/xml/xslt/OME2OME-CA.xslt
Copying IMAGE directories
\_ images
Copying CONFIG directories
\_ conf
Copying HTML directories
\_ JavaScript
\_ html
-------------------
Core Binary Setup
-------------------
(All verbose information logged in /var/tmp/OME/install/BinaryBuilds.log)
Installing core binaries
\_ Compiling [SUCCESS].
\_ Installing [SUCCESS].
Installing OMEIS
\_ Configuring [SUCCESS].
\_ Compiling [SUCCESS].
\_ Installing [SUCCESS].
------------------------------
Perl Module Dependency Setup
------------------------------
(All verbose information logged in /var/tmp/OME/install/PerlModuleTask.log)
Checking modules
\_ DBI 1.40 [OK].
\_ Digest::MD5 2.33 [OK].
\_ MD5 [OK].
\_ MIME::Base64 2.21 [OK].
\_ Apache::Session [NOT INSTALLED]
Would you like to install Apache::Session from the repository ? [y/n]: y
\_ Downloading
http://openmicroscopy.org/packages/perl/Apache-Session-1.54.tar.gz [SUCCESS].
\_ Unpacking [SUCCESS].
\_ Configuring [SUCCESS].
\_ Compiling [SUCCESS].
\_ Testing [SUCCESS].
\_ Installing [SUCCESS].
\_ Log::Agent [NOT INSTALLED]
Would you like to install Log::Agent from the repository ? [y/n]: y
\_ Downloading
http://openmicroscopy.org/packages/perl/Log-Agent-0.208.tar.gz [SUCCESS].
\_ Unpacking [SUCCESS].
\_ Configuring [SUCCESS].
\_ Compiling [SUCCESS].
\_ Testing [FAILURE].
Unable to test module, see PerlModuleTask.log for details. at (eval 31) line 1
Some tests failed, would you like to continue anyway ? [y/n]: y
\_ Installing [SUCCESS].
\_ DBD::Pg 1.31 [OK].
\_ Test::Harness 2.40 [OK].
\_ Test::Simple 0.47 [OK].
\_ HTML::Template [NOT INSTALLED]
Would you like to install HTML::Template from the repository ? [y/n]: y
\_ Downloading
http://openmicroscopy.org/packages/perl/HTML-Template-2.6.tar.gz [SUCCESS].
\_ Unpacking [SUCCESS].
\_ Configuring [SUCCESS].
\_ Compiling [SUCCESS].
\_ Testing [SUCCESS].
\_ Installing [SUCCESS].
\_ IPC::Run [NOT INSTALLED]
Would you like to install IPC::Run from the repository ? [y/n]: y
\_ Downloading
http://openmicroscopy.org/packages/perl/IPC-Run-0.75.tar.gz [SUCCESS].
\_ Unpacking [SUCCESS].
\_ Configuring [SUCCESS].
\_ Compiling [SUCCESS].
\_ Testing [SUCCESS].
\_ Installing [SUCCESS].
\_ Class::Accessor [NOT INSTALLED]
Would you like to install Class::Accessor from the repository ? [y/n]: y
\_ Downloading
http://openmicroscopy.org/packages/perl/Class-Accessor-0.17.tar.gz [SUCCESS].
\_ Unpacking [SUCCESS].
\_ Configuring [SUCCESS].
\_ Compiling [SUCCESS].
\_ Testing [SUCCESS].
\_ Installing [SUCCESS].
\_ Class::Data::Inheritable [NOT INSTALLED]
Would you like to install Class::Data::Inheritable from the repository ?
[y/n]: y
\_ Downloading
http://openmicroscopy.org/packages/perl/Class-Data-Inheritable-0.02.tar.gz
[SUCCESS].
\_ Unpacking [SUCCESS].
\_ Configuring [SUCCESS].
\_ Compiling [SUCCESS].
\_ Testing [SUCCESS].
\_ Installing [SUCCESS].
\_ File::Temp 0.14 [OK].
\_ Exporter::Lite [NOT INSTALLED]
Would you like to install Exporter::Lite from the repository ? [y/n]: y
\_ Downloading
http://openmicroscopy.org/packages/perl/Exporter-Lite-0.01.tar.gz [SUCCESS].
\_ Unpacking [SUCCESS].
\_ Configuring [SUCCESS].
\_ Compiling [SUCCESS].
\_ Testing [SUCCESS].
\_ Installing [SUCCESS].
\_ UNIVERSAL::exports [NOT INSTALLED]
Would you like to install UNIVERSAL::exports from the repository ? [y/n]: y
\_ Downloading
http://openmicroscopy.org/packages/perl/UNIVERSAL-exports-0.03.tar.gz
[SUCCESS].
\_ Unpacking [SUCCESS].
\_ Configuring [SUCCESS].
\_ Compiling [SUCCESS].
\_ Testing [SUCCESS].
\_ Installing [SUCCESS].
\_ GD [NOT INSTALLED]
Would you like to install GD from the repository ? [y/n]: y
\_ Downloading http://openmicroscopy.org/packages/perl/GD-1.33.tar.gz
[SUCCESS].
\_ Unpacking [SUCCESS].
\_ Configuring NOTICE: This module requires libgd 1.8.3 or higher
(shared library version 4.X).
Please choose the features that match how libgd was built:
Build JPEG support? [y]
Build FreeType support? [y]
Build XPM support? [y]
If you experience compile problems, please check the @INC, @LIBPATH and @LIBS
arrays defined in Makefile.PL and manually adjust, if necessary.
Checking if your kit is complete...
Looks good
Writing Makefile for GD
[SUCCESS].
\_ Compiling [FAILURE].
Errors executing task: Unable to compile module, see PerlModuleTask.log for
details. at (eval 31) line 1
main::run_tasks() called at install.pl line 249
# Looks like your test died before it could output anything.
[root at delos OME]#
]]
*************************************************************************
Content of file /var/tmp/OME/install/PerlModuleTask.log
[[
ERRORS LOADING MODULE "Apache::Session" -- OUTPUT FROM EVAL: "Can't locate
Apache/Session.pm in @INC (@INC contains: /usr/kits/OME/OME/src/perl2
/usr/lib/perl5/5.8.3/i386-linux-thread-multi /usr/lib/perl5/5.8.3
/usr/lib/perl5/site_perl/5.8.3/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.2/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.1/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.3 /usr/lib/perl5/site_perl/5.8.2
/usr/lib/perl5/site_perl/5.8.1 /usr/lib/perl5/site_perl/5.8.0
/usr/lib/perl5/site_perl
/usr/lib/perl5/vendor_perl/5.8.3/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.2/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.1/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.3 /usr/lib/perl5/vendor_perl/5.8.2
/usr/lib/perl5/vendor_perl/5.8.1 /usr/lib/perl5/vendor_perl/5.8.0
/usr/lib/perl5/vendor_perl .) at (eval 35) line 1.
BEGIN failed--compilation aborted at (eval 35) line 1.
"
SUCCESS DOWNLOADING PACKAGE -- OUTPUT FROM DOWNLOADER "wget -nv -N":
"16:55:36
URL:http://openmicroscopy.org/packages/perl/Apache-Session-1.54.tar.gz
[28,073/28,073] -> "Apache-Session-1.54.tar.gz" [1]
"
SUCCESS EXTRACTING /var/tmp/OME/install/Apache-Session-1.54.tar.gz
USING PERL CONFIGURE SCRIPT -- "Makefile.pl"
SUCCESS CONFIGURING MODULE -- OUTPUT: "Checking if your kit is complete...
Looks good
Writing Makefile for Apache::Session
"
SUCCESS COMPILING MODULE -- OUTPUT: "cp Session/Store/File.pm
blib/lib/Apache/Session/Store/File.pm
cp Session/Generate/MD5.pm blib/lib/Apache/Session/Generate/MD5.pm
cp Session/Store/Sybase.pm blib/lib/Apache/Session/Store/Sybase.pm
cp Session/Store/DBI.pm blib/lib/Apache/Session/Store/DBI.pm
cp Session/Lock/MySQL.pm blib/lib/Apache/Session/Lock/MySQL.pm
cp Session/Store/Oracle.pm blib/lib/Apache/Session/Store/Oracle.pm
cp Session/Sybase.pm blib/lib/Apache/Session/Sybase.pm
cp Session/Serialize/Sybase.pm blib/lib/Apache/Session/Serialize/Sybase.pm
cp Session/Generate/ModUniqueId.pm
blib/lib/Apache/Session/Generate/ModUniqueId.pm
cp Session/Lock/File.pm blib/lib/Apache/Session/Lock/File.pm
cp Session/Store/MySQL.pm blib/lib/Apache/Session/Store/MySQL.pm
cp Session.pm blib/lib/Apache/Session.pm
cp Session/File.pm blib/lib/Apache/Session/File.pm
cp Session/Postgres.pm blib/lib/Apache/Session/Postgres.pm
cp Session/Generate/ModUsertrack.pm
blib/lib/Apache/Session/Generate/ModUsertrack.pm
cp Session/Lock/Null.pm blib/lib/Apache/Session/Lock/Null.pm
cp Session/DB_File.pm blib/lib/Apache/Session/DB_File.pm
cp Session/Oracle.pm blib/lib/Apache/Session/Oracle.pm
cp Session/Store/DB_File.pm blib/lib/Apache/Session/Store/DB_File.pm
cp Session/Lock/Semaphore.pm blib/lib/Apache/Session/Lock/Semaphore.pm
cp Session/Serialize/Storable.pm
blib/lib/Apache/Session/Serialize/Storable.pm
cp Session/Flex.pm blib/lib/Apache/Session/Flex.pm
cp Session/Serialize/UUEncode.pm
blib/lib/Apache/Session/Serialize/UUEncode.pm
cp Session/Store/Postgres.pm blib/lib/Apache/Session/Store/Postgres.pm
cp Session/Serialize/Base64.pm blib/lib/Apache/Session/Serialize/Base64.pm
cp Session/MySQL.pm blib/lib/Apache/Session/MySQL.pm
Manifying blib/man3/Apache::Session::Store::File.3pm
Manifying blib/man3/Apache::Session::Generate::MD5.3pm
Manifying blib/man3/Apache::Session::Store::Sybase.3pm
Manifying blib/man3/Apache::Session::Lock::MySQL.3pm
Manifying blib/man3/Apache::Session::Store::Oracle.3pm
Manifying blib/man3/Apache::Session::Sybase.3pm
Manifying blib/man3/Apache::Session::Serialize::Sybase.3pm
Manifying blib/man3/Apache::Session::Generate::ModUniqueId.3pm
Manifying blib/man3/Apache::Session::Lock::File.3pm
Manifying blib/man3/Apache::Session::Store::MySQL.3pm
Manifying blib/man3/Apache::Session.3pm
Manifying blib/man3/Apache::Session::File.3pm
Manifying blib/man3/Apache::Session::Postgres.3pm
Manifying blib/man3/Apache::Session::Lock::Null.3pm
Manifying blib/man3/Apache::Session::DB_File.3pm
Manifying blib/man3/Apache::Session::Generate::ModUsertrack.3pm
Manifying blib/man3/Apache::Session::Oracle.3pm
Manifying blib/man3/Apache::Session::Lock::Semaphore.3pm
Manifying blib/man3/Apache::Session::Store::DB_File.3pm
Manifying blib/man3/Apache::Session::Serialize::Storable.3pm
Manifying blib/man3/Apache::Session::Flex.3pm
Manifying blib/man3/Apache::Session::Serialize::UUEncode.3pm
Manifying blib/man3/Apache::Session::Store::Postgres.3pm
Manifying blib/man3/Apache::Session::Serialize::Base64.3pm
Manifying blib/man3/Apache::Session::MySQL.3pm
"
SUCCESS TESTING MODULE -- OUTPUT: "PERL_DL_NONLAZY=1 /usr/bin/perl
"-MExtUtils::Command::MM" "-e" "test_harness(0, 'blib/lib', 'blib/arch')" t/*.t
t/99base64.........ok
t/99dbfile.........ok
t/99dbfilestore....ok
t/99file...........ok
t/99filelock.......ok
t/99filestore......ok
t/99flex...........ok
t/99md5gen.........ok
t/99moduniqgen.....ok
t/99mysql..........skipped
all skipped: no reason given
t/99mysqllock......skipped
all skipped: no reason given
t/99mysqlstore.....skipped
all skipped: no reason given
t/99nulllock.......ok
t/99oracle.........skipped
all skipped: no reason given
t/99postgres.......skipped
all skipped: no reason given
t/99semaphore......ok
t/99storable.......ok
t/99uue............ok
All tests successful, 5 tests skipped.
Files=18, Tests=100, 5 wallclock secs ( 1.14 cusr + 2.34 csys = 3.48 CPU)
"
SUCCESS INSTALLING MODULE -- OUTPUT: "Installing
/usr/lib/perl5/site_perl/5.8.3/Apache/Session.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Oracle.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Postgres.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/DB_File.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/MySQL.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Flex.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/File.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Sybase.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Generate/MD5.pm
Installing
/usr/lib/perl5/site_perl/5.8.3/Apache/Session/Generate/ModUniqueId.pm
Installing
/usr/lib/perl5/site_perl/5.8.3/Apache/Session/Generate/ModUsertrack.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Store/DBI.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Store/Oracle.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Store/Postgres.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Store/DB_File.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Store/MySQL.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Store/File.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Store/Sybase.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Lock/Null.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Lock/MySQL.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Lock/Semaphore.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Lock/File.pm
Installing
/usr/lib/perl5/site_perl/5.8.3/Apache/Session/Serialize/UUEncode.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Serialize/Base64.pm
Installing
/usr/lib/perl5/site_perl/5.8.3/Apache/Session/Serialize/Storable.pm
Installing /usr/lib/perl5/site_perl/5.8.3/Apache/Session/Serialize/Sybase.pm
Installing /usr/share/man/man3/Apache::Session::Postgres.3pm
Installing /usr/share/man/man3/Apache::Session::Flex.3pm
Installing /usr/share/man/man3/Apache::Session::MySQL.3pm
Installing /usr/share/man/man3/Apache::Session::Store::DB_File.3pm
Installing /usr/share/man/man3/Apache::Session::Serialize::Sybase.3pm
Installing /usr/share/man/man3/Apache::Session::Lock::Semaphore.3pm
Installing /usr/share/man/man3/Apache::Session::Lock::MySQL.3pm
Installing /usr/share/man/man3/Apache::Session::Sybase.3pm
Installing /usr/share/man/man3/Apache::Session::Store::MySQL.3pm
Installing /usr/share/man/man3/Apache::Session::Lock::Null.3pm
Installing /usr/share/man/man3/Apache::Session::Oracle.3pm
Installing /usr/share/man/man3/Apache::Session::DB_File.3pm
Installing /usr/share/man/man3/Apache::Session.3pm
Installing /usr/share/man/man3/Apache::Session::File.3pm
Installing /usr/share/man/man3/Apache::Session::Serialize::Base64.3pm
Installing /usr/share/man/man3/Apache::Session::Generate::ModUniqueId.3pm
Installing /usr/share/man/man3/Apache::Session::Serialize::Storable.3pm
Installing /usr/share/man/man3/Apache::Session::Serialize::UUEncode.3pm
Installing /usr/share/man/man3/Apache::Session::Store::Oracle.3pm
Installing /usr/share/man/man3/Apache::Session::Store::Sybase.3pm
Installing /usr/share/man/man3/Apache::Session::Lock::File.3pm
Installing /usr/share/man/man3/Apache::Session::Generate::MD5.3pm
Installing /usr/share/man/man3/Apache::Session::Store::Postgres.3pm
Installing /usr/share/man/man3/Apache::Session::Store::File.3pm
Installing /usr/share/man/man3/Apache::Session::Generate::ModUsertrack.3pm
Writing
/usr/lib/perl5/site_perl/5.8.3/i386-linux-thread-multi/auto/Apache/Session/.packlist
Appending installation info to
/usr/lib/perl5/5.8.3/i386-linux-thread-multi/perllocal.pod
"
ERRORS LOADING MODULE "Log::Agent" -- OUTPUT FROM EVAL: "Can't locate
Log/Agent.pm in @INC (@INC contains: /usr/kits/OME/OME/src/perl2
/usr/lib/perl5/5.8.3/i386-linux-thread-multi /usr/lib/perl5/5.8.3
/usr/lib/perl5/site_perl/5.8.3/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.2/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.1/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/site_perl/5.8.3 /usr/lib/perl5/site_perl/5.8.2
/usr/lib/perl5/site_perl/5.8.1 /usr/lib/perl5/site_perl/5.8.0
/usr/lib/perl5/site_perl
/usr/lib/perl5/vendor_perl/5.8.3/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.2/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.1/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.0/i386-linux-thread-multi
/usr/lib/perl5/vendor_perl/5.8.3 /usr/lib/perl5/vendor_perl/5.8.2
/usr/lib/perl5/vendor_perl/5.8.1 /usr/lib/perl5/vendor_perl/5.8.0
/usr/lib/perl5/vendor_perl .) at (eval 36) line 1, <STDIN> line 11.
BEGIN failed--compilation aborted at (eval 36) line 1, <STDIN> line 11.
"
SUCCESS DOWNLOADING PACKAGE -- OUTPUT FROM DOWNLOADER "wget -nv -N":
"16:55:59
URL:http://openmicroscopy.org/packages/perl/Log-Agent-0.208.tar.gz
[45,247/45,247] -> "Log-Agent-0.208.tar.gz" [1]
"
SUCCESS EXTRACTING /var/tmp/OME/install/Log-Agent-0.208.tar.gz
USING PERL CONFIGURE SCRIPT -- "Makefile.pl"
SUCCESS CONFIGURING MODULE -- OUTPUT: "Checking if your kit is complete...
Looks good
Writing Makefile for Log::Agent
"
SUCCESS COMPILING MODULE -- OUTPUT: "cp Agent/Tag.pm blib/lib/Log/Agent/Tag.pm
cp Agent/Driver.pm blib/lib/Log/Agent/Driver.pm
cp Agent/File/Native.pm blib/lib/Log/Agent/File/Native.pm
cp Agent/Tag/Callback.pm blib/lib/Log/Agent/Tag/Callback.pm
cp Agent/Channel/Handle.pm blib/lib/Log/Agent/Channel/Handle.pm
cp Agent/Priorities.pm blib/lib/Log/Agent/Priorities.pm
AutoSplitting blib/lib/Log/Agent/Priorities.pm
(blib/lib/auto/Log/Agent/Priorities)
cp Agent/Tag/Priority.pm blib/lib/Log/Agent/Tag/Priority.pm
cp Agent/Channel.pm blib/lib/Log/Agent/Channel.pm
cp Agent/Formatting.pm blib/lib/Log/Agent/Formatting.pm
cp Agent/Driver/Default.pm blib/lib/Log/Agent/Driver/Default.pm
cp Agent/Driver/Syslog.pm blib/lib/Log/Agent/Driver/Syslog.pm
cp Agent/Channel/Syslog.pm blib/lib/Log/Agent/Channel/Syslog.pm
cp Agent/Tag/Caller.pm blib/lib/Log/Agent/Tag/Caller.pm
cp Agent/File_Pool.pm blib/lib/Log/Agent/File_Pool.pm
cp Agent/Driver/Datum.pm blib/lib/Log/Agent/Driver/Datum.pm
cp Agent/Driver/File.pm blib/lib/Log/Agent/Driver/File.pm
cp Agent.pm blib/lib/Log/Agent.pm
AutoSplitting blib/lib/Log/Agent.pm (blib/lib/auto/Log/Agent)
cp Agent/Tag_List.pm blib/lib/Log/Agent/Tag_List.pm
cp Agent/Tag/String.pm blib/lib/Log/Agent/Tag/String.pm
cp Agent/Stamping.pm blib/lib/Log/Agent/Stamping.pm
cp Agent/Channel/File.pm blib/lib/Log/Agent/Channel/File.pm
cp Agent/Driver/Silent.pm blib/lib/Log/Agent/Driver/Silent.pm
cp Agent/Message.pm blib/lib/Log/Agent/Message.pm
cp Agent/Prefixer.pm blib/lib/Log/Agent/Prefixer.pm
Manifying blib/man3/Log::Agent::Tag.3pm
Manifying blib/man3/Log::Agent::File::Native.3pm
Manifying blib/man3/Log::Agent::Driver.3pm
Manifying blib/man3/Log::Agent::Tag::Callback.3pm
Manifying blib/man3/Log::Agent::Channel::Handle.3pm
Manifying blib/man3/Log::Agent::Priorities.3pm
Manifying blib/man3/Log::Agent::Tag::Priority.3pm
Manifying blib/man3/Log::Agent::Channel.3pm
Manifying blib/man3/Log::Agent::Driver::Default.3pm
Manifying blib/man3/Log::Agent::Driver::Syslog.3pm
Manifying blib/man3/Log::Agent::Channel::Syslog.3pm
Manifying blib/man3/Log::Agent::Tag::Caller.3pm
Manifying blib/man3/Log::Agent::Driver::Datum.3pm
Manifying blib/man3/Log::Agent::Driver::File.3pm
Manifying blib/man3/Log::Agent.3pm
Manifying blib/man3/Log::Agent::Tag_List.3pm
Manifying blib/man3/Log::Agent::Stamping.3pm
Manifying blib/man3/Log::Agent::Tag::String.3pm
Manifying blib/man3/Log::Agent::Driver::Silent.3pm
Manifying blib/man3/Log::Agent::Channel::File.3pm
Manifying blib/man3/Log::Agent::Message.3pm
"
]]
---
Graham Klyne
Image Bioinformatics Laboratory
Department of Zoology, University of Oxford
South Parks Road, Oxford OX1 3PS, UK
E-mail: <Graham.Klyne at zoo.ox.ac.uk>
Direct phone: +44-(0)1865-281991
Departmental fax: +44-(0)1865-310447
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