[FLIMfit-users] FLIMfit 5.1.1

Support list for users of FLIMfit Fluorescence Lifetime Imaging tool. flimfit-users at lists.openmicroscopy.org.uk
Thu Aug 2 13:23:39 BST 2018


Dear all,
got a new Leica FALCON system and wanted to analyse TCSPC data with "FLIMfitFrontEnd" under Matlab R2018a.
I downloaded FLIMfit from https://github.com/flimfit/FLIMfit.
Running FLIMfit showed that substantial folders and functions are missing (see copy from Matlab Command Window).
Commenting out 'diagnostics' leads to a next missing file ('icons.mat')

Any Idea how to solve this problem?
Seems that files are missing in repository.


Thanks in advance,

Andre


PS: Matlab Command Window output
-------------------------------------------------------------------------
>> FLIMfit
Warning: Name is nonexistent or not a directory: Z:\GIT\FLIMfit\FLIMfitFrontEnd\matlab-ui-common\phasor
> In path (line 109)
  In addpath (line 96)
  In addpath_global_analysis (line 31)
  In FLIMfit (line 30)
Warning: Name is nonexistent or not a directory: Z:\GIT\FLIMfit\FLIMfitFrontEnd\OMEROMatlab\helper
> In path (line 109)
  In addpath (line 96)
  In addpath_global_analysis (line 57)
  In FLIMfit (line 30)
Warning: Name is nonexistent or not a directory: Z:\GIT\FLIMfit\FLIMfitFrontEnd\OMEROMatlab\io
> In path (line 109)
  In addpath (line 96)
  In addpath_global_analysis (line 57)
  In FLIMfit (line 30)
Warning: Name is nonexistent or not a directory: Z:\GIT\FLIMfit\FLIMfitFrontEnd\OMEROMatlab\libs
> In path (line 109)
  In addpath (line 96)
  In addpath_global_analysis (line 57)
  In FLIMfit (line 30)
Warning: Name is nonexistent or not a directory: Z:\GIT\FLIMfit\FLIMfitFrontEnd\OMEROMatlab\roi
> In path (line 109)
  In addpath (line 96)
  In addpath_global_analysis (line 57)
  In FLIMfit (line 30)
Undefined function or variable 'diagnostics'.

Error in flim_fit_ui (line 37)
            diagnostics('program','start');

Error in FLIMfit (line 39)
ui = flim_fit_ui(false);
37              diagnostics('program','start');
-------------------------------------------------------------------------

------------------------------------------
Dr. Andre Zeug
Cellular Neurophysiology (OE4230)
Hannover Medical School
Carl-Neuberg-Str. 1,
30625 Hannover
Germany

Tel:  +49 511 532 5026
Fax: +49 511 532 8302
mailto: zeug.andre at mh-hannover.de<mailto:zeug.andre at mh-hannover.de>
http://www.mh-hannover.de/cellneurophys/AZ.html


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