<html>
<head>
<meta http-equiv="Content-Type" content="text/html; charset=Windows-1252">
</head>
<body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">
Hi Mohanapriya,
<div class=""><br class="">
</div>
<div class="">Using ‘<span style="color: rgb(69, 69, 69); font-family: 'Helvetica Neue', serif, EmojiFont;" class="">%s</span>’ in the conversion will split the output into a separate file for each series. Is that what you intended? When you say that the planes
are separate is it the channel fields that are separate but you wish them to be interleaved? The bfconvert command currently bases the channel interleaving of the output file as the same as the that used for the input reader. </div>
<div class=""><br class="">
</div>
<div class="">I was unable to access the file you linked, would you be able to upload it to <a href="https://www.openmicroscopy.org/qa2/qa/upload/?" class="">https://www.openmicroscopy.org/qa2/qa/upload/?</a></div>
<div class=""><br class="">
</div>
<div class="">With Thanks,</div>
<div class="">David Gault</div>
<div class=""><br class="">
<div>
<blockquote type="cite" class="">
<div class="">On 6 Mar 2019, at 19:36, Narapareddy, Mohanapriya <<a href="mailto:mohanapriya.narapareddy@emory.edu" class="">mohanapriya.narapareddy@emory.edu</a>> wrote:</div>
<br class="Apple-interchange-newline">
<div class="">
<div id="OwaReferenceAttachments" contenteditable="false" style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">
<table style="padding-bottom: 13px; border-width: 0px; border-style: none;" class="">
<tbody class="">
<tr valign="top" class="">
<td class="">
<table style="border-width: 0px 0px 1px; border-color: rgb(199, 199, 199); border-style: none none dotted;" class="">
<tbody class="">
<tr valign="top" class="">
<td style="padding-bottom: 7px;" class="">
<table align="left" style="padding-right: 28px; border-width: 0px; background-color: rgb(255, 255, 255); border-spacing: 0px;" class="">
<tbody class="">
<tr valign="top" class="">
<td style="padding: 0px;" class="">
<div id="OwaReferenceAttachmentDescription" style="padding-left: 3px; font-size: 14px; font-family: 'Segoe UI', 'Segoe WP', 'Segoe UI WPC', Tahoma, Arial, sans-serif; color: rgb(102, 102, 102);" class="">
Narapareddy, Mohanapriya has shared a OneDrive for Business file with you. To view it, click the link below.</div>
</td>
</tr>
</tbody>
</table>
</td>
</tr>
<tr valign="top" class="">
<td class=""><a href="https://emory-my.sharepoint.com/personal/mnarapa_emory_edu/Documents/Attachments/C3L.01064.21.scn" target="_blank" class="">
<table align="left" style="padding-right: 28px; padding-bottom: 10px; border-width: 0px; height: 20px; background-color: rgb(255, 255, 255); border-spacing: 0px;" class="">
<tbody class="">
<tr valign="top" class="">
<td style="padding: 0px;" class="">
<div style="background-color: rgb(255, 255, 255); height: 20px; width: 20px; max-height: 20px;" class="">
<a href="https://emory-my.sharepoint.com/personal/mnarapa_emory_edu/Documents/Attachments/C3L.01064.21.scn" target="_blank" class=""><img width="20" src="https://r1.res.office365.com/owa/prem/images/dc-generic_20.png" style="border: 0px;" class=""></a></div>
</td>
<td class="">
<div id="OwaReferenceAttachmentFileName2" style="padding: 0px 0px 0px 5px; font-size: 14px; font-family: 'Segoe UI', 'Segoe WP', 'Segoe UI WPC', Tahoma, Arial, sans-serif; color: rgb(0, 114, 198);" class="">
<a href="https://emory-my.sharepoint.com/personal/mnarapa_emory_edu/Documents/Attachments/C3L.01064.21.scn" target="_blank" style="text-decoration: none; margin: 0px; font-size: 14px; font-family: 'Segoe UI', 'Segoe WP', 'Segoe UI WPC', Tahoma, Arial, sans-serif; color: rgb(0, 114, 198);" class="">C3L.01064.21.scn</a></div>
</td>
</tr>
</tbody>
</table>
</a></td>
</tr>
</tbody>
</table>
</td>
</tr>
</tbody>
</table>
</div>
<div id="divtagdefaultwrapper" dir="ltr" style="font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12pt; font-family: Calibri, Helvetica, sans-serif;" class="">
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Hello,</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">I am facing problem with scn to tiff conversion. </div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Please help me with this issue.</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Here i attach my scn file.</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><br class="">
</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Here is the command i used. please correct me if i am wrong.</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><span style="color: rgb(69, 69, 69); font-family: 'Helvetica Neue', serif, EmojiFont; font-size: 12px;" class=""> </span><span style="color: rgb(69, 69, 69); font-family: 'Helvetica Neue', serif, EmojiFont; font-size: 12px;" class="">bfconvert
-bigtiff C3L.01064.21.scn sample1-%s.tif</span><br class="">
</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><br class="">
</div>
<div id="Signature" class="">
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Thanks,</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Mohanapriya</div>
</div>
</div>
<br style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">
<hr style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">
<font face="Arial" color="Gray" size="1" style="font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class=""><br class="">
This e-mail message (including any attachments) is for the sole use of<br class="">
the intended recipient(s) and may contain confidential and privileged<br class="">
information. If the reader of this message is not the intended<br class="">
recipient, you are hereby notified that any dissemination, distribution<br class="">
or copying of this message (including any attachments) is strictly<br class="">
prohibited.<br class="">
<br class="">
If you have received this message in error, please contact<br class="">
the sender by reply e-mail message and destroy all copies of the<br class="">
original message (including attachments).<br class="">
</font><span style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; float: none; display: inline !important;" class="">_______________________________________________</span><br style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">
<span style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; float: none; display: inline !important;" class="">ome-users
mailing list</span><br style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">
<a href="mailto:ome-users@lists.openmicroscopy.org.uk" style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">ome-users@lists.openmicroscopy.org.uk</a><br style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">
<a href="http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users" style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users</a></div>
</blockquote>
</div>
<br class="">
</div>
<br>
<span style="font-size:10pt;">The University of Dundee is a registered Scottish Charity, No: SC015096</span>
</body>
</html>