<html>
<head>
<meta http-equiv="Content-Type" content="text/html;
charset=windows-1252">
</head>
<body text="#000000" bgcolor="#FFFFFF">
<p>Hi Sebastien,</p>
<p>thanks for your help!</p>
<p>We have tried and put the jar file under lib/server and restarted
the server. However, that seems to not have been enough - upload
of *.sld files still fails.</p>
<p>Probably we missed additional steps, but unfortunately it is not
too clear to us right now what else needs to happen. Are there
additional files that need to be placed at other locations? <br>
</p>
<p>Sorry for the vague question...</p>
<p>If you have some more details on that would be greatly
appreciated :)</p>
<p>Thanks and cheers,<br>
Kai<br>
</p>
<br>
<div class="moz-cite-prefix">On 02/06/2018 06:01 PM, Sebastien
Besson (Staff) wrote:<br>
</div>
<blockquote type="cite"
cite="mid:6F15D1CF-4BC8-4AE1-AC2D-721D729E3D16@dundee.ac.uk">
<meta http-equiv="Content-Type" content="text/html;
charset=windows-1252">
<div style="line-height: 1.38; margin-top: 0pt; margin-bottom:
0pt;" class=""><span style="font-size: 11pt; font-family: Arial; font-variant-ligatures: normal; font-variant-east-asian: normal; font-variant-position: normal; vertical-align: baseline; white-space: pre-wrap;" class="">Hi
Kai,</span></div>
<br class="">
<div style="line-height: 1.38; margin-top: 0pt; margin-bottom:
0pt;" class=""><span style="font-size: 11pt; font-family: Arial; font-variant-ligatures: normal; font-variant-east-asian: normal; font-variant-position: normal; vertical-align: baseline; white-space: pre-wrap;" class="">Since
Bio-Formats 5.2.0, the native support for 3i Slidebook files is indeed provided via a external third-party JAR developed and maintained by Intelligent Imaging [1]. In Fiji, the installation of this JAR is managed via the Slidebook update site maintained by
3i.</span></div>
<br class="">
<div style="line-height: 1.38; margin-top: 0pt; margin-bottom:
0pt;" class=""><span style="font-size: 11pt; font-family: Arial; font-variant-ligatures: normal; font-variant-east-asian: normal; font-variant-position: normal; vertical-align: baseline; white-space: pre-wrap;" class="">Adding
support for this reader in OMERO should work the same way as other server extensions [2]. The critical part is to have the Slidebook classes available to the server, typically by putting the appropriate JAR under lib/server and restarting the latter.</span></div>
<br class="">
<div style="line-height: 1.38; margin-top: 0pt; margin-bottom:
0pt;" class=""><span style="font-size: 11pt; font-family: Arial; font-variant-ligatures: normal; font-variant-east-asian: normal; font-variant-position: normal; vertical-align: baseline; white-space: pre-wrap;" class="">It
would be really interesting to hear from the 3i developer or support team whether they have tested this workflow or if they have plans to support it in the future.</span></div>
<div style="line-height: 1.38; margin-top: 0pt; margin-bottom:
0pt;" class=""><span style="font-size: 11pt; font-family: Arial; font-variant-ligatures: normal; font-variant-east-asian: normal; font-variant-position: normal; vertical-align: baseline; white-space: pre-wrap;" class="">
</span><span style="font-size: 11pt; font-family: Arial; font-variant-ligatures: normal; font-variant-east-asian: normal; font-variant-position: normal; vertical-align: baseline; white-space: pre-wrap;" class="">Best,</span></div>
<div style="line-height: 1.38; margin-top: 0pt; margin-bottom:
0pt;" class=""><span style="font-size: 11pt; font-family: Arial; font-variant-ligatures: normal; font-variant-east-asian: normal; font-variant-position: normal; vertical-align: baseline; white-space: pre-wrap;" class="">Sebastien</span></div>
<br class="">
<div style="line-height: 1.38; margin-top: 0pt; margin-bottom:
0pt;" class=""><span style="font-size: 11pt; font-family: Arial; font-variant-ligatures: normal; font-variant-east-asian: normal; font-variant-position: normal; vertical-align: baseline; white-space: pre-wrap;" class="">[1]
</span><a
href="http://blog.openmicroscopy.org/file-formats/community/2016/08/31/bf-partnerships/"
style="text-decoration:none;" class="" moz-do-not-send="true"><span style="font-size: 11pt; font-family: Arial; color: rgb(17, 85, 204); font-variant-ligatures: normal; font-variant-east-asian: normal; font-variant-position: normal; text-decoration: underline; -webkit-text-decoration-skip: none; vertical-align: baseline; white-space: pre-wrap;" class="">http://blog.openmicroscopy.org/file-formats/community/2016/08/31/bf-partnerships/</span></a><span style="font-size: 11pt; font-family: Arial; font-variant-ligatures: normal; font-variant-east-asian: normal; font-variant-position: normal; vertical-align: baseline; white-space: pre-wrap;" class="">
</span></div>
<div style="line-height: 1.38; margin-top: 0pt; margin-bottom:
0pt;" class=""><span style="font-size: 11pt; font-family: Arial; font-variant-ligatures: normal; font-variant-east-asian: normal; font-variant-position: normal; vertical-align: baseline; white-space: pre-wrap;" class="">[2]
</span><a
href="https://docs.openmicroscopy.org/omero/5.4.3/developers/Server/ExtendingOmero.html"
style="text-decoration:none;" class="" moz-do-not-send="true"><span style="font-size: 11pt; font-family: Arial; color: rgb(17, 85, 204); font-variant-ligatures: normal; font-variant-east-asian: normal; font-variant-position: normal; text-decoration: underline; -webkit-text-decoration-skip: none; vertical-align: baseline; white-space: pre-wrap;" class="">https://docs.openmicroscopy.org/omero/5.4.3/developers/Server/ExtendingOmero.html</span></a></div>
<br class="">
<div><br class="">
<blockquote type="cite" class="">
<div class="">On 5 Feb 2018, at 12:26, Kai Schleicher <<a
href="mailto:kai.schleicher@unibas.ch" class=""
moz-do-not-send="true">kai.schleicher@unibas.ch</a>>
wrote:</div>
<br class="Apple-interchange-newline">
<div class="">
<div class="">Dear OME team,<br class="">
<br class="">
I'd like to import slidebook *.sld files in OMERO.<br
class="">
<br class="">
Since Bio-Formats relies on a plugin from an external
update site [1] to enable import of SlideBook SLD files, I
was wondering if there is a way to integrate this plugin
into our OMERO as well?<br class="">
<br class="">
Thanks and cheers,<br class="">
Kai<br class="">
<br class="">
[1]: <a href="http://sites.imagej.net/SlideBook/"
class="" moz-do-not-send="true">http://sites.imagej.net/SlideBook/</a><br
class="">
<br class="">
-- <br class="">
<blockquote type="cite" class="">
<blockquote type="cite" class="">Please note my NEW
PHONE NUMBERS: +41 61 207 57 31 (direct) +41 61 207 22
50 (central)<<<br class="">
</blockquote>
</blockquote>
Kai Schleicher, PhD | Research Associate in Advanced Light
Microscopy | Biozentrum, University of Basel |
Klingelbergstrasse 50/70 | CH-4056 Basel |<br class="">
Phone: +41 61 207 57 31 (direct) +41 61 207 22 50
(central) | <a href="mailto:kai.schleicher@unibas.ch"
class="" moz-do-not-send="true">
kai.schleicher@unibas.ch</a> | <a
href="http://www.biozentrum.unibas.ch" class=""
moz-do-not-send="true">
www.biozentrum.unibas.ch</a> | <a
href="http://www.microscopynetwork.unibas.ch" class=""
moz-do-not-send="true">
www.microscopynetwork.unibas.ch</a><br class="">
<br class="">
_______________________________________________<br
class="">
ome-users mailing list<br class="">
<a href="mailto:ome-users@lists.openmicroscopy.org.uk"
class="" moz-do-not-send="true">ome-users@lists.openmicroscopy.org.uk</a><br
class="">
<a class="moz-txt-link-freetext" href="http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users">http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users</a><br
class="">
</div>
</div>
</blockquote>
</div>
<br class="">
<br>
<span style="font-size:10pt;">The University of Dundee is a
registered Scottish Charity, No: SC015096</span>
<br>
<fieldset class="mimeAttachmentHeader"></fieldset>
<br>
<pre wrap="">_______________________________________________
ome-users mailing list
<a class="moz-txt-link-abbreviated" href="mailto:ome-users@lists.openmicroscopy.org.uk">ome-users@lists.openmicroscopy.org.uk</a>
<a class="moz-txt-link-freetext" href="http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users">http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users</a>
</pre>
</blockquote>
<br>
</body>
</html>