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Hi Kouichi,
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<div class="">Thank you for providing updates on your testing. We are still investigating this issue internally to try and isolate the problem and provide a solution. It does appear to be caused by a conflict of Java classes. One potential solution that might
be worth trying is to force MATLAB to give priority to the Bio-Formats library when loading the Java class path. This can be done by modifying the file javaclasspath.txt.</div>
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<li class="">If you do not have a javaclasspath.txt file already you can create one in your MATLAB preferences folder.</li><li class="">To find the location of the preferences folder you can use the command 'prefdir'</li><li class="">In the text file add the following:</li></ul>
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<div class="">path/to/bioformats_package.jar</div>
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<div class="">For more details on adding jars to javaclassoath.txt you can see <a href="https://uk.mathworks.com/help/matlab/matlab_external/static-path.html#bvjg_eg-1" class="">https://uk.mathworks.com/help/matlab/matlab_external/static-path.html#bvjg_eg-1</a></div>
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<div class="">With Thanks,</div>
<div class="">David Gault</div>
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<div class="">On 24 Oct 2017, at 11:44, Kouichi C. Nakamura <<a href="mailto:kouichi.c.nakamura@gmail.com" class="">kouichi.c.nakamura@gmail.com</a>> wrote:</div>
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<p class="">Dear Roger,</p>
<p class="">I temporally removed `C:\Program Files\MATLAB\R2017b\java\jarext\jung\jung-jai.jar` and relaunched MATLAB R2017b.</p>
<p class="">When trying to open the .jp2 file, I've got the same error message (Error using
<a href="matlab:matlab.internal.language.introspective.errorDocCallback%28%27bfGetPlane%27,%20%27D:%5CDropbox%5CPrivate_Dropbox%5Cmatlab_toolbox%5Cbfmatlab%5CbfGetPlane.m%27,%2078%29" style="font-weight:bold" class="">
bfGetPlane</a> (<a href="matlab:%20opentoline%28%27D:%5CDropbox%5CPrivate_Dropbox%5Cmatlab_toolbox%5Cbfmatlab%5CbfGetPlane.m%27,78,0%29" class="">line 78</a>)).<br class="">
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Best,<br class="">
Kouichi<br class="">
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<pre class="moz-signature" cols="72">--
Kouichi C. Nakamura, PhD
Senior Postdoctoral Neuroscientist
MRC Brain Network Dynamics Unit
University of Oxford
Mansfield Road, Oxford OX1 3TH, United Kingdom
+44-1865-271582 (office)
<a class="moz-txt-link-freetext" href="http://www.mrcbndu.ox.ac.uk/people/dr-kouichi-c-nakamura">http://www.mrcbndu.ox.ac.uk/people/dr-kouichi-c-nakamura</a>
<a class="moz-txt-link-abbreviated" href="mailto:kouichi.c.nakamura@gmail.com">kouichi.c.nakamura@gmail.com</a>
<a class="moz-txt-link-abbreviated" href="mailto:kouichi.nakamura@pharm.ox.ac.uk">kouichi.nakamura@pharm.ox.ac.uk</a></pre>
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