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<p>Hi Balaji,</p>
<p>thanks for your reply and the link to the guide.</p>
<p>Connecting to our OMERO from Cellprofiler works already like a
charm (and was without doubt achieved using your guide :)!<br>
<br>
What I wanted to do now is to have CellProfiler<b>Analyst </b>to
also be connected to OMERO. <br>
</p>
<p>See the <a moz-do-not-send="true"
href="http://forum.cellprofiler.org/t/cellprofileranalyst-and-omero/4962/2">crosspost
in the CPA forum</a> for details.</p>
<p>I was just wondering if anyone had already tried to do the same
and had some guidance :)</p>
<p>Thanks and cheers,<br>
Kai<br>
</p>
<br>
<div class="moz-cite-prefix">On 07/27/2017 05:27 PM, Balaji
Ramalingam (Staff) wrote:<br>
</div>
<blockquote type="cite"
cite="mid:6066638F-7184-40BA-A646-F140D3246254@dundee.ac.uk">
<pre wrap="">Dear Kai,
To troubleshoot the issue in better detail could you please let us know if you followed all the steps given in the following page,
<a class="moz-txt-link-freetext" href="https://github.com/CellProfiler/CellProfiler/wiki/OMERO:-Accessing-images-from-CellProfiler">https://github.com/CellProfiler/CellProfiler/wiki/OMERO:-Accessing-images-from-CellProfiler</a>
specifically,
<a class="moz-txt-link-freetext" href="https://github.com/CellProfiler/CellProfiler/wiki/OMERO:-Accessing-images-from-CellProfiler#omero-server-revisions">https://github.com/CellProfiler/CellProfiler/wiki/OMERO:-Accessing-images-from-CellProfiler#omero-server-revisions</a>
This would have helped you match your OMERO server version to the jars present within cell profiler.
(It does look like a server-client mismatch issue)
Thank you,
Best,
Balaji
On 26/07/2017, 16:13, "ome-users on behalf of Kai Schleicher" <a class="moz-txt-link-rfc2396E" href="mailto:ome-users-bounces@lists.openmicroscopy.org.ukonbehalfofkai.schleicher@unibas.ch"><ome-users-bounces@lists.openmicroscopy.org.uk on behalf of kai.schleicher@unibas.ch></a> wrote:
sorry for the second email but I forgot to mention what the correct URL
isntead of the one in the screenshot should have been:
<a class="moz-txt-link-freetext" href="https://omero.biozentrum.unibas.ch/webclient/img_detail/459060/">https://omero.biozentrum.unibas.ch/webclient/img_detail/459060/</a>
On 07/26/2017 05:09 PM, Kai Schleicher wrote:
> Dear list,
>
> We are using the LoadData module in CellProfiler 2.2 to analyse images
> fetched directly from our OMERO and this is working really well! I am
> super happy with that :)
>
> What I'd like to find out now is if I could use CellProfilerAnalyst
> 2.2.1 in the next step, have it connect to our OMERO and get the
> images within CPA as well via "access CellProfiler Analyst images via
> URL" from the "ExportToDatabase" module in CellProfiler.
>
> Basically this gives me a field into which I can enter the URL to my
> image on the OMERO server, but I have not figured out the correct way
> to enter the URL , as you can see from the screenshot.
>
> I've attached my LoadData module input csv and the CPA properties file
> for references.
>
> Does anyone have experience setting this up?
>
> Thanks and cheers,
> Kai
>
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</pre>
</blockquote>
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