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<p>Hi Simon,</p>
<p>Thank you for your answer. I think I will go with the key-value
store.<br>
</p>
<p>I saw table information for images in the webinar "OMERO Plus for
High Content Screening & Analysis" at 0:46:04. Is this only
supported by OMERO Plus?<br>
<a class="moz-txt-link-freetext" href="https://glencoesoftware.com/webinars.html">https://glencoesoftware.com/webinars.html</a><br>
</p>
<p>Cheers,</p>
<p>Frederik<br>
</p>
<br>
<div class="moz-cite-prefix">On 25.10.2016 14:16, Simon Li wrote:<br>
</div>
<blockquote
cite="mid:CAMvbRBGaDXa6XfUpBnodL_acUE+007sNa7xwZiuap_bS6T7Xrg@mail.gmail.com"
type="cite">
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<div dir="ltr">
<div>
<div>
<div>
<div>
<div>Hi Frederik<br>
<br>
</div>
We don't have a way of directly displaying Table
information alongside images at the moment. However
we've done some related work for the IDR project, where
we built a CLI plugin to convert a table into
MapAnnotations on images, e.g. see the Key-Value pairs
on <a moz-do-not-send="true"
href="http://idr-demo.openmicroscopy.org/webclient/?show=image-1920093"
target="_blank">
http://idr-demo.openmicroscopy<wbr>.org/webclient/?show=image-192<wbr>0093</a><br>
<br>
</div>
<div>The main rationale for this approach was to
distinguish between the raw data held in the table, and
the client-visible view of that data.<br>
</div>
<br>
</div>
It's still considered "developmental", but you can see
previousl conversations on the topic here:<br>
- <a moz-do-not-send="true"
href="http://lists.openmicroscopy.org.uk/pipermail/ome-devel/2016-June/003694.html"
target="_blank">
http://lists.openmicroscopy.or<wbr>g.uk/pipermail/ome-devel/2016-<wbr>June/003694.html</a><br>
- <a moz-do-not-send="true"
href="http://lists.openmicroscopy.org.uk/pipermail/ome-devel/2016-August/003733.html"
target="_blank">
http://lists.openmicroscopy.<wbr>org.uk/pipermail/ome-devel/<wbr>2016-August/003733.html</a><br>
<br>
And some example configuration files here:<br>
<a moz-do-not-send="true"
href="https://github.com/IDR/idr-metadata/blob/master/idr0018-neff-histopathology/experimentA/idr0018-experimentA-annotation.csv"
target="_blank">- https://github.com/IDR/idr-met<wbr>adata/blob/master/idr0018-neff<wbr>-histopathology/experimentA/<wbr>idr0018-experimentA-<wbr>annotation.csv</a><br>
<a moz-do-not-send="true"
href="https://github.com/IDR/idr-metadata/blob/master/idr0018-neff-histopathology/experimentA/idr0018-experimentA-bulkmap-config.yml"
target="_blank">- https://github.com/IDR/idr-met<wbr>adata/blob/master/idr0018-neff<wbr>-histopathology/experimentA/<wbr>idr0018-experimentA-bulkmap-<wbr>config.yml</a><br>
<br>
</div>
I'll have to check whether the support for populating Images
in Datasets made it into the last release.<br>
<br>
</div>
<div>Hope this helps<br>
<br>
</div>
Simon<br>
<div>
<div><br>
<div><br>
<br>
<br>
<div>
<div><br>
</div>
</div>
</div>
</div>
</div>
</div>
<div class="gmail_extra"><br>
<div class="gmail_quote">On 25 October 2016 at 10:54, Frederik
Grüll <span dir="ltr">
<<a moz-do-not-send="true"
href="mailto:frederik.gruell@unibas.ch" target="_blank">frederik.gruell@unibas.ch</a>></span>
wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0
.8ex;border-left:1px #ccc solid;padding-left:1ex">
Dear all,<br>
<br>
the OMERO webclient offers a nice overview of table data for
wells in a<br>
screen with OMERO.tables. I can import the data with the
script<br>
"Populate Metadata" and see it in the table accordion on the
right pane.<br>
<br>
Is there a way to have the same for images instead wells? I
made some<br>
experiments, eg. with<br>
<a moz-do-not-send="true"
href="https://github.com/openmicroscopy/openmicroscopy/blob/v5.2.6/examples/OmeroTables/MeasurementTable.java"
rel="noreferrer" target="_blank">https://github.com/<wbr>openmicroscopy/openmicroscopy/<wbr>blob/v5.2.6/examples/<wbr>OmeroTables/MeasurementTable.<wbr>java</a><br>
and by adjusting "Populate Metadata", but could not make the
table<br>
appear for images.<br>
<br>
Cheers,<br>
<br>
Frederik<br>
<br>
<br>
--<br>
Dr. Frederik Grüll | Imaging Expert | G1055, Biozentrum,
University of<br>
Basel | Klingelbergstr. 50/70 | CH-4056 Basel Phone: <a
moz-do-not-send="true"
href="tel:%2B41%20%2861%29%20207%202250"
value="+41612072250">
+41 (61) 207 2250</a> |<br>
<a moz-do-not-send="true"
href="mailto:frederik.gruell@unibas.ch">frederik.gruell@unibas.ch</a>
| <a moz-do-not-send="true"
href="http://www.biozentrum.unibas.ch" rel="noreferrer"
target="_blank">
www.biozentrum.unibas.ch</a><br>
<br>
<br>
The University of Dundee is a registered Scottish Charity,
No: SC015096<br>
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<br>
<div class="moz-signature">-- <br>
Dr. Frederik Grüll | Imaging Expert | G1055, Biozentrum,
University of Basel | Klingelbergstr. 50/70 | CH-4056 Basel
Phone: +41 (61) 207 2250 | <a class="moz-txt-link-abbreviated" href="mailto:frederik.gruell@unibas.ch">frederik.gruell@unibas.ch</a> |
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