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Hi Mubarik,
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<div class="">Could you tell us which version of Bio-Formats you are currently using? </div>
<div class="">You can find out by going to Help -> About Plugins -> Bio-Formats Plugins, the version will be listed beside ‘Release’.</div>
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<div class="">Also if it is possible would you be able to upload a sample file for testing to:</div>
<div class=""><a href="https://www.openmicroscopy.org/qa2/qa/upload/" class="">https://www.openmicroscopy.org/qa2/qa/upload/</a></div>
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<div class="">With Thanks,</div>
<div class="">David Gault</div>
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<blockquote type="cite" class="">
<div class="">On 23 Aug 2016, at 14:42, Burki, Mubarik <<a href="mailto:z.burki.12@ucl.ac.uk" class="">z.burki.12@ucl.ac.uk</a>> wrote:</div>
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">Dear All,</div>
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">I am trying to open some files using Fiji that I have previously opened several times. However, I am now unable to open my lif files and <span style="font-size: 12pt;" class="">the following error
comes up:</span></div>
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<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""> (Fiji Is Just) ImageJ 2.0.0-rc-49/1.51f; Java 1.8.0_66 [64-bit]; Mac OS X 10.9.5; 37MB of 1682MB (2%)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""> </b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class="">java.lang.IllegalArgumentException: order is unexpected length (4)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at loci.formats.DimensionSwapper.swapDimensions(DimensionSwapper.java:91)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at loci.plugins.in.ImportProcess.initializeDimOrder(ImportProcess.java:575)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at loci.plugins.in.ImportProcess.execute(ImportProcess.java:155)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at loci.plugins.in.Importer.showDialogs(Importer.java:140)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at loci.plugins.in.Importer.run(Importer.java:76)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at loci.plugins.LociImporter.run(LociImporter.java:78)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at ij.IJ.runUserPlugIn(IJ.java:217)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at ij.IJ.runPlugIn(IJ.java:181)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at ij.IJ.runPlugIn(IJ.java:170)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at HandleExtraFileTypes.openImage(HandleExtraFileTypes.java:499)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at HandleExtraFileTypes.run(HandleExtraFileTypes.java:72)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at ij.IJ.runUserPlugIn(IJ.java:217)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at ij.IJ.runPlugIn(IJ.java:181)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at ij.IJ.runPlugIn(IJ.java:170)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at ij.io.Opener.openWithHandleExtraFileTypes(Opener.java:515)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at ij.io.Opener.openImage(Opener.java:369)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at ij.io.Opener.openImage(Opener.java:243)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at ij.io.Opener.open(Opener.java:110)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at ij.io.Opener.openAndAddToRecent(Opener.java:292)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at ij.plugin.DragAndDrop.openFile(DragAndDrop.java:192)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at ij.plugin.DragAndDrop.run(DragAndDrop.java:159)</b></div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><b class=""><span class="Apple-tab-span" style="white-space: pre;"></span>at java.lang.Thread.run(Thread.java:745)</b></div>
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<div class="">I have tried updating FIJI and reinstalling it. Nothing seems to work. </div>
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<div class="">Please help!</div>
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<span style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; float: none; display: inline !important;" class="">_______________________________________________</span><br style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">
<span style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; float: none; display: inline !important;" class="">ome-users
mailing list</span><br style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">
<a href="mailto:ome-users@lists.openmicroscopy.org.uk" style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">ome-users@lists.openmicroscopy.org.uk</a><br style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">
<a href="http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users" style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users</a></div>
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