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</o:shapelayout></xml><![endif]--></head><body lang=DE link=blue vlink=purple><div class=WordSection1><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'>Hi David,<o:p></o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'><o:p> </o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'>thanks for your reply.<o:p></o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'><o:p> </o:p></span></p><p class=MsoNormal><span lang=EN-GB style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'>Since the file is too big (>4.4 GB), I uploaded the file on Dropbox. </span><span style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'>I hope this alright. Here ist the link:<o:p></o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'><o:p> </o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'>https://www.dropbox.com/s/5xk7q4bshp8w04c/AlSaroori-Sample-File_35000-images_OMX-V3_STORM-Mode.dv?dl=0<o:p></o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'><o:p> </o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'>Thanks for your help.<o:p></o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'><o:p> </o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'>Best,<o:p></o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'>Alex<o:p></o:p></span></p><p class=MsoNormal><span style='font-size:11.0pt;font-family:"Calibri",sans-serif;mso-fareast-language:EN-US'><o:p> </o:p></span></p><div><div style='border:none;border-top:solid #E1E1E1 1.0pt;padding:3.0pt 0cm 0cm 0cm'><p class=MsoNormal><b><span style='font-size:11.0pt;font-family:"Calibri",sans-serif'>Von:</span></b><span style='font-size:11.0pt;font-family:"Calibri",sans-serif'> ome-users [mailto:ome-users-bounces@lists.openmicroscopy.org.uk] <b>Im Auftrag von </b>David Gault (Staff)<br><b>Gesendet:</b> Freitag, 8. Juli 2016 11:01<br><b>An:</b> OME User Support List <ome-users@lists.openmicroscopy.org.uk><br><b>Betreff:</b> Re: [ome-users] Problem open DV Files (time lapse file >33000 images)<o:p></o:p></span></p></div></div><p class=MsoNormal><o:p> </o:p></p><p class=MsoNormal>Hi Alex, <o:p></o:p></p><div><p class=MsoNormal><o:p> </o:p></p></div><div><p class=MsoNormal>Firstly apologies for the delayed response time. I believe you are right in that the issue is related to the very large plane count rather than the actual file size. We have sample DV files that > 4GB which we can test but I don’t believe we having any with such a large image count. <o:p></o:p></p></div><div><p class=MsoNormal><o:p> </o:p></p></div><div><p class=MsoNormal>If it would be possible to upload one of the failing files for testing that would certainly be much appreciated. You can submit the sample file to the link below:<o:p></o:p></p></div><div><p class=MsoNormal><a href="https://www.openmicroscopy.org/qa2/qa/upload/">https://www.openmicroscopy.org/qa2/qa/upload/</a><o:p></o:p></p></div><div><p class=MsoNormal><o:p> </o:p></p></div><div><p class=MsoNormal>With Thanks, <o:p></o:p></p><div><p class=MsoNormal>David Gault<o:p></o:p></p></div><div><p class=MsoNormal><o:p> </o:p></p><div><blockquote style='margin-top:5.0pt;margin-bottom:5.0pt'><div><p class=MsoNormal>On 5 Jul 2016, at 11:55, Alexander Al Saroori <<a href="mailto:saroori.alexander@googlemail.com">saroori.alexander@googlemail.com</a>> wrote:<o:p></o:p></p></div><p class=MsoNormal><o:p> </o:p></p><div><p class=MsoNormal>Hi again,<br><br>Sorry for bothering you again. <br><br>But I have just realized, that the problem is probably not connected with the size of my file but with the amount of images in my stack. I can't open image stacks with 35000 images and a total size of 4.8 GB (256x256, STORM mode, OMX-V3) in Fiji with bioformats. Image stacks with 20000 images but a size of >5 GB, I can open without a problem (same acquisition mode, but 512x512). So I think it is not a problem with the size but with the images in the stack size.<br><br>Thanks for your help.<br><br>Cheers,<br>Alex<br><br>-----Ursprüngliche Nachricht-----<br>Von: Alexander Al Saroori [<a href="mailto:saroori.alexander@googlemail.com">mailto:saroori.alexander@googlemail.com</a>] <br>Gesendet: Montag, 4. Juli 2016 17:21<br>An: OME User Support List <<a href="mailto:ome-users@lists.openmicroscopy.org.uk">ome-users@lists.openmicroscopy.org.uk</a>><br>Betreff: Open DV Files > 4GB in Fiji fails<br><br>Hi together,<br><br>I have tried to open DV-Files >4GB in Fiji (retrieved from OMX-V3) which fails the entire time. I tried different Fiji versions and different OS (Ubuntu 14.04, Windows 10). But it fails every time. Please find attached the error message.<br><br>Do you have any suggestions what I could do?<br><br>Thank you!<br><br><span lang=EN-GB>Best,<br>Alex<br><FijiError.txt>_______________________________________________<br>ome-users mailing list<br></span><a href="mailto:ome-users@lists.openmicroscopy.org.uk"><span lang=EN-GB>ome-users@lists.openmicroscopy.org.uk</span></a><span lang=EN-GB><br></span><a href="http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users"><span lang=EN-GB>http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users</span></a><span lang=EN-GB><o:p></o:p></span></p></div></blockquote></div><p class=MsoNormal><span lang=EN-GB><o:p> </o:p></span></p></div></div><p class=MsoNormal><span lang=EN-GB><br></span><span style='font-size:10.0pt'>The University of Dundee is a registered Scottish Charity, No: SC015096</span> <o:p></o:p></p></div></body></html>