<html><head><meta http-equiv="Content-Type" content="text/html charset=iso-8859-1"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space;" class="">Hi Harri,<div class=""><br class=""></div><div class="">I wonder if you could check whether you get the same UI issue in the Insight client?</div><div class="">If so, then this is likely an issue with initial reading of the Plate on import.</div><div class="">The easiest way for us to look at this would be if you could send us an example file.</div><div class="">Do you have an example that is quite small?</div><div class="">If you could upload it at <a href="https://www.openmicroscopy.org/qa2/qa/upload/" class="">https://www.openmicroscopy.org/qa2/qa/upload/</a></div><div class="">that would be great - thanks,</div><div class=""><br class=""></div><div class=""> Will.</div><div class=""><br class=""></div><div class=""><br class=""><div><blockquote type="cite" class=""><div class="">On 11 May 2016, at 11:07, Jäälinoja, Harri Tapio <<a href="mailto:harri.jaalinoja@helsinki.fi" class="">harri.jaalinoja@helsinki.fi</a>> wrote:</div><br class="Apple-interchange-newline"><div class=""><div id="divtagdefaultwrapper" style="font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; font-size: 12pt; background-color: rgb(255, 255, 255); font-family: Calibri, Arial, Helvetica, sans-serif;" class=""><div style="margin-top: 0px; margin-bottom: 0px;" class="">Hi,</div><div style="margin-top: 0px; margin-bottom: 0px;" class=""><br class=""></div><div style="margin-top: 0px; margin-bottom: 0px;" class="">I uploaded some Thermo CellInsight plate data to OMERO 5.2.3, and noticed that there is a problem with the well column index. The wells are numbered A01 -> H12, but OMERO webclient viewer seems to think the index starts from A00, and shifts the wells to the right. Here are some screenshots to show what I mean:</div><div style="margin-top: 0px; margin-bottom: 0px;" class=""><a href="https://wiki.helsinki.fi/display/LMU/OMERO+troubleshooting" id="LPlnk943162" title="https://wiki.helsinki.fi/display/LMU/OMERO+troubleshooting
Ctrl+Click or tap to follow the link" class="">https://wiki.helsinki.fi/display/LMU/OMERO+troubleshooting</a><br class=""></div><div style="margin-top: 0px; margin-bottom: 0px;" class=""><br class=""></div><div style="margin-top: 0px; margin-bottom: 0px;" class="">In case of a full plate, the right-most column is not shown at all.</div><p style="margin-top: 0px; margin-bottom: 0px;" class=""></p><div class=""><br class=""></div><div class="">hajaalin@dhcp-asv-66:~/tmp$ ls LMU-CELLINSIGHT_151117170001/|head -2</div><div class="">LMU-CELLINSIGHT_151117170001_A01f00d0.C01</div><div class="">LMU-CELLINSIGHT_151117170001_A01f01d0.C01</div><div class="">hajaalin@dhcp-asv-66:~/tmp$ ls LMU-CELLINSIGHT_151117170001/|tail -7</div><div class="">LMU-CELLINSIGHT_151117170001_H12f14d0.C01</div><div class="">LMU-CELLINSIGHT_151117170001_H12f15d0.C01</div><div class=""><br class=""></div><p style="margin-top: 0px; margin-bottom: 0px;" class=""></p><div style="margin-top: 0px; margin-bottom: 0px;" class=""><br class=""></div><div style="margin-top: 0px; margin-bottom: 0px;" class="">As you see in omero_cellomics.png, part of the code has the index right. There "General" tab on the right shows E04 when viewer says E5. Same goes for field index.</div><div style="margin-top: 0px; margin-bottom: 0px;" class=""><br class=""></div><div style="margin-top: 0px; margin-bottom: 0px;" class="">I have also a feature request related to the viewer: would it be difficult to show a montage of the fields of a given well? It wouldn't even have to be a real stiched image. </div><div style="margin-top: 0px; margin-bottom: 0px;" class=""><br class=""></div><div style="margin-top: 0px; margin-bottom: 0px;" class="">Best regards,</div><div style="margin-top: 0px; margin-bottom: 0px;" class="">Harri</div><div style="margin-top: 0px; margin-bottom: 0px;" class=""><br class=""></div><div id="Signature" class=""><div id="divtagdefaultwrapper" style="font-size: 12pt; background-color: rgb(255, 255, 255); font-family: Calibri, Arial, Helvetica, sans-serif;" class=""><div style="margin-top: 0px; margin-bottom: 0px;" class="">---</div><div style="margin-top: 0px; margin-bottom: 0px;" class="">Harri Jäälinoja</div><div style="margin-top: 0px; margin-bottom: 0px;" class="">Light Microscopy Unit</div><div style="margin-top: 0px; margin-bottom: 0px;" class="">Institute of Biotechnology</div><div style="margin-top: 0px; margin-bottom: 0px;" class="">University of Helsinki</div></div></div></div><span style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; float: none; display: inline !important;" class="">_______________________________________________</span><br style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class=""><span style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px; float: none; display: inline !important;" class="">ome-users mailing list</span><br style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class=""><a href="mailto:ome-users@lists.openmicroscopy.org.uk" style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">ome-users@lists.openmicroscopy.org.uk</a><br style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class=""><a href="http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users" style="font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: auto; text-align: start; text-indent: 0px; text-transform: none; white-space: normal; widows: auto; word-spacing: 0px; -webkit-text-stroke-width: 0px;" class="">http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users</a></div></blockquote></div><br class=""></div></body></html>