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<p>Hi Will,</p>
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<p>it's the same in Insight client:</p>
<p><a href="https://wiki.helsinki.fi/display/LMU/OMERO+troubleshooting?preview=/196947403/196949286/omeroi_cellomics.png" id="LPlnk126472" title="https://wiki.helsinki.fi/display/LMU/OMERO+troubleshooting?preview=/196947403/196949286/omeroi_cellomics.png
Ctrl+Click or tap to follow the link">https://wiki.helsinki.fi/display/LMU/OMERO+troubleshooting?preview=/196947403/196949286/omeroi_cellomics.png</a></p>
<p><br>
</p>
<p>I uploaded a full plate, one field per well, about 20MB.</p>
<p><br>
</p>
<p>Thanks!</p>
<p>Harri<br>
</p>
<p><img src="https://wiki.helsinki.fi/display/LMU/OMERO+troubleshooting?preview=/196947403/196949286/omeroi_cellomics.png"></p>
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<div id="divRplyFwdMsg" dir="ltr"><font face="Calibri, sans-serif" style="font-size:11pt" color="#000000"><b>From:</b> ome-users <ome-users-bounces@lists.openmicroscopy.org.uk> on behalf of William Moore <will@lifesci.dundee.ac.uk><br>
<b>Sent:</b> 12 May 2016 12:57:37<br>
<b>To:</b> OME User Support List<br>
<b>Subject:</b> Re: [ome-users] Cellomics plate view column index off</font>
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<div>Hi Harri,
<div class=""><br class="">
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<div class="">I wonder if you could check whether you get the same UI issue in the Insight client?</div>
<div class="">If so, then this is likely an issue with initial reading of the Plate on import.</div>
<div class="">The easiest way for us to look at this would be if you could send us an example file.</div>
<div class="">Do you have an example that is quite small?</div>
<div class="">If you could upload it at <a href="https://www.openmicroscopy.org/qa2/qa/upload/" class="">https://www.openmicroscopy.org/qa2/qa/upload/</a></div>
<div class="">that would be great - thanks,</div>
<div class=""><br class="">
</div>
<div class=""> Will.</div>
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<blockquote type="cite" class="">
<div class="">On 11 May 2016, at 11:07, Jäälinoja, Harri Tapio <<a href="mailto:harri.jaalinoja@helsinki.fi" class="">harri.jaalinoja@helsinki.fi</a>> wrote:</div>
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">Hi,</div>
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">I uploaded some Thermo CellInsight plate data to OMERO 5.2.3, and noticed that there is a problem with the well column index. The wells are numbered A01 -> H12, but OMERO webclient viewer seems to think
the index starts from A00, and shifts the wells to the right. Here are some screenshots to show what I mean:</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><a href="https://wiki.helsinki.fi/display/LMU/OMERO+troubleshooting" id="LPlnk943162" title="https://wiki.helsinki.fi/display/LMU/OMERO+troubleshooting
Ctrl+Click or tap to follow the link" class="">https://wiki.helsinki.fi/display/LMU/OMERO+troubleshooting</a><br class="">
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">In case of a full plate, the right-most column is not shown at all.</div>
<p style="margin-top: 0px; margin-bottom: 0px;" class=""></p>
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<div class="">hajaalin@dhcp-asv-66:~/tmp$ ls LMU-CELLINSIGHT_151117170001/|head -2</div>
<div class="">LMU-CELLINSIGHT_151117170001_A01f00d0.C01</div>
<div class="">LMU-CELLINSIGHT_151117170001_A01f01d0.C01</div>
<div class="">hajaalin@dhcp-asv-66:~/tmp$ ls LMU-CELLINSIGHT_151117170001/|tail -7</div>
<div class="">LMU-CELLINSIGHT_151117170001_H12f14d0.C01</div>
<div class="">LMU-CELLINSIGHT_151117170001_H12f15d0.C01</div>
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">As you see in omero_cellomics.png, part of the code has the index right. There "General" tab on the right shows E04 when viewer says E5. Same goes for field index.</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class=""><br class="">
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">I have also a feature request related to the viewer: would it be difficult to show a montage of the fields of a given well? It wouldn't even have to be a real stiched image. </div>
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">Best regards,</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Harri</div>
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<div id="Signature" class="">
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<div style="margin-top: 0px; margin-bottom: 0px;" class="">---</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Harri Jäälinoja</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Light Microscopy Unit</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">Institute of Biotechnology</div>
<div style="margin-top: 0px; margin-bottom: 0px;" class="">University of Helsinki</div>
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