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<p dir="ltr">Hi Shaun</p>
<p dir="ltr">Have you seen our Centos 7 installation walkthrough?<br>
<a href="http://www.openmicroscopy.org/site/support/omero5.2/sysadmins/unix/server-centos7.html">http://www.openmicroscopy.org/site/support/omero5.2/sysadmins/unix/server-centos7.html</a></p>
<p dir="ltr">If you're using a virtualenv you'll have to modify the suggested scripts, but based on your previous installation it sounds like you've figured that out.</p>
<p dir="ltr">At first glance it looks like you're missing the ice-servers package.</p>
<p dir="ltr">Simon</p>
<div class="gmail_quote">On 26 Apr 2016 22:03, "Shaun Hare" <<a href="mailto:Shaun.Hare@nottingham.ac.uk">Shaun.Hare@nottingham.ac.uk</a>> wrote:<br type="attribution">
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">
<div style="word-wrap:break-word">
<div>We are running through a new installation on centos7 and seem to keep getting thwarted - although we are learning lots I am afraid I am leaning on this mailing list a lot - my latest issue is as follows </div>
<div><br>
</div>
<div>There seems to be an issue with our install whereby when we start we cannot get the icegridnode version</div>
<div>see error below </div>
<div><br>
</div>
<div>ice has been installed using yum install ice ice-python from <a href="http://www.zeroc.com/download/Ice/3.5/" target="_blank">http://www.zeroc.com/download/Ice/3.5/</a></div>
<div><br>
</div>
<div>Any thoughts or help appreciated ?</div>
<div><br>
</div>
<div>./OMERO.server/bin/omero --debug=debug admin start</div>
<div>Returning popen: ['icegridnode', '--version']</div>
<div>Traceback (most recent call last):</div>
<div> File "./OMERO.server/bin/omero", line 125, in <module></div>
<div> rv = omero.cli.argv()</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 1438, in argv</div>
<div> cli.invoke(args[1:])</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 952, in invoke</div>
<div> stop = self.onecmd(line, previous_args)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 1029, in onecmd</div>
<div> self.execute(line, previous_args)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 1111, in execute</div>
<div> args.func(args)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/plugins/prefs.py", line 73, in open_and_close_config</div>
<div> return func(*args, **kwargs)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/plugins/admin.py", line 757, in start</div>
<div> self.startasync(args, config)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/plugins/prefs.py", line 73, in open_and_close_config</div>
<div> return func(*args, **kwargs)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/plugins/admin.py", line 708, in startasync</div>
<div> self.checkice()</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/plugins/admin.py", line 1594, in checkice</div>
<div> popen = self.ctx.popen(["icegridnode", "--version"])</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 1202, in popen</div>
<div> stdout=stdout, stderr=stderr)</div>
<div> File "/usr/lib64/python2.7/subprocess.py", line 711, in __init__</div>
<div> errread, errwrite)</div>
<div> File "/usr/lib64/python2.7/subprocess.py", line 1327, in _execute_child</div>
<div> raise child_exception</div>
<div>OSError: [Errno 2] No such file or directory</div>
<div><br>
</div>
<div>OMERO Diagnostics show the command aren’t there - but I cannot find any binarys in /opt/Ice-3.5.1/</div>
<div>or anywhere else - am I missing something </div>
<div><br>
</div>
<div>
<div>================================================================================</div>
<div>OMERO Diagnostics 5.2.2-ice35-b17</div>
<div>================================================================================</div>
<div><br>
</div>
<div>Commands: java -version 1.8.0 (/bin/java)</div>
<div>Commands: python -V 2.7.5 (/home/omero/venv/bin/python -- 2 others)</div>
<div>Commands: icegridnode --version not found</div>
<div>Commands: icegridadmin --version not found</div>
<div>Commands: psql --version 9.4.7 (/bin/psql)</div>
<div><br>
</div>
<div>No icegridadmin available: Cannot check server list</div>
<div><br>
</div>
<div>Log dir: /home/omero/OMERO.server/var/log exists</div>
<div>Log files: Blitz-0.log n/a</div>
<div>Log files: DropBox.log n/a</div>
<div>Log files: FileServer.log n/a</div>
<div>Log files: Indexer-0.log n/a</div>
<div>Log files: MonitorServer.log n/a</div>
<div>Log files: OMEROweb.log n/a</div>
<div>Log files: Processor-0.log n/a</div>
<div>Log files: Tables-0.log n/a</div>
<div>Log files: TestDropBox.log n/a</div>
<div>Log files: Total size 0.00 MB</div>
<div><br>
</div>
<div>Error while parsing logs</div>
<div><br>
</div>
<div>Environment:OMERO_HOME=/home/omero/OMERO.server</div>
<div>Environment:OMERO_NODE=(unset)</div>
<div>Environment:OMERO_MASTER=(unset)</div>
<div>Environment:OMERO_USERDIR=(unset)</div>
<div>Environment:OMERO_TMPDIR=(unset)</div>
<div>Environment:PATH=/home/omero/venv/bin:/sbin:/bin:/usr/sbin:/usr/bin</div>
<div>Environment:PYTHONPATH=(unset)</div>
<div>Environment:ICE_HOME=/opt/Ice-3.5.1/</div>
<div>Environment:LD_LIBRARY_PATH=(unset)</div>
<div>Environment:DYLD_LIBRARY_PATH=(unset)</div>
<div><br>
</div>
<div>Traceback (most recent call last):</div>
<div> File "./OMERO.server/bin/omero", line 125, in <module></div>
<div> rv = omero.cli.argv()</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 1438, in argv</div>
<div> cli.invoke(args[1:])</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 952, in invoke</div>
<div> stop = self.onecmd(line, previous_args)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 1029, in onecmd</div>
<div> self.execute(line, previous_args)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 1111, in execute</div>
<div> args.func(args)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/plugins/prefs.py", line 73, in open_and_close_config</div>
<div> return func(*args, **kwargs)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/plugins/admin.py", line 1353, in diagnostics</div>
<div> p = self.ctx.popen(self._cmd("-e", "application list")) # popen</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 1202, in popen</div>
<div> stdout=stdout, stderr=stderr)</div>
<div> File "/usr/lib64/python2.7/subprocess.py", line 711, in __init__</div>
<div> errread, errwrite)</div>
<div> File "/usr/lib64/python2.7/subprocess.py", line 1327, in _execute_child</div>
<div> raise child_exception</div>
<div>OSError: [Errno 2] No such file or directory</div>
<div>(venv)[omero@lslapome01 ~]$ ./OMERO.server/bin/omero admin start</div>
<div>Traceback (most recent call last):</div>
<div> File "./OMERO.server/bin/omero", line 125, in <module></div>
<div> rv = omero.cli.argv()</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 1438, in argv</div>
<div> cli.invoke(args[1:])</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 952, in invoke</div>
<div> stop = self.onecmd(line, previous_args)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 1029, in onecmd</div>
<div> self.execute(line, previous_args)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 1111, in execute</div>
<div> args.func(args)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/plugins/prefs.py", line 73, in open_and_close_config</div>
<div> return func(*args, **kwargs)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/plugins/admin.py", line 757, in start</div>
<div> self.startasync(args, config)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/plugins/prefs.py", line 73, in open_and_close_config</div>
<div> return func(*args, **kwargs)</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/plugins/admin.py", line 708, in startasync</div>
<div> self.checkice()</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/plugins/admin.py", line 1594, in checkice</div>
<div> popen = self.ctx.popen(["icegridnode", "--version"])</div>
<div> File "/home/omero/OMERO.server/lib/python/omero/cli.py", line 1202, in popen</div>
<div> stdout=stdout, stderr=stderr)</div>
<div> File "/usr/lib64/python2.7/subprocess.py", line 711, in __init__</div>
<div> errread, errwrite)</div>
<div> File "/usr/lib64/python2.7/subprocess.py", line 1327, in _execute_child</div>
<div> raise child_exception</div>
<div>OSError: [Errno 2] No such file or directory</div>
</div>
<div><br>
</div>
<div><br>
</div>
<div>Many thanks</div>
<div><br>
</div>
<div>Shaun</div>
<div><br>
</div>
<div><br>
</div>
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