id = "/import/bc2/home/nimwegen/GROUP/MM_Data/20150304/raw_stacks/20150304_glu_multiexp_1_MMStack_Pos0.ome.tif";

import ij.*;
import ij.process.ImageProcessor;
import loci.plugins.*;
import loci.formats.*;
import loci.formats.in.*;
import loci.plugins.util.ImageProcessorReader;

t_start = System.currentTimeMillis();
IFormatReader reader = new ImageReader();
reader.setGroupFiles(false);
//MetadataOptions options = reader.getMetadataOptions();
//options.setMetadataLevel(MetadataLevel.MINIMUM);
reader.setId(id);
dt_reg = System.currentTimeMillis() - t_start;
IJ.log(">> " + 1.0 * dt_reg/1000 + "s to create a reader.");
sizeT = reader.getSizeT();
IJ.log(sizeT + " frames.");

ipreader = new ImageProcessorReader(reader);
ImageStack stack = new ImageStack(reader.getSizeX(), reader.getSizeY());
for (i = 0; i<10; i++) {
	idx = reader.getIndex(0, 1, i); // z, c, t (from 0)
	IJ.log(idx + "");
	ip = ipreader.openProcessors(idx);	
	stack.addSlice("", ip[0]);
}
ImagePlus imp = new ImagePlus("foo", stack);
reader.close();
ipreader.close();
imp.show();
dt_reg = System.currentTimeMillis() - t_start;
IJ.log(">> " + 1.0 * dt_reg/1000 + "s to open the 10 first frames.");