<html><head><meta http-equiv="Content-Type" content="text/html charset=us-ascii"></head><body style="word-wrap: break-word; -webkit-nbsp-mode: space; -webkit-line-break: after-white-space; "><div apple-content-edited="true"><div>Hi Forrest,<br><br>I have looked into the file you have sent us and it appears that everything is correct.<br>As given by the ZEN software, the Channel names are: DAPI, Alexa Fluor 488, Alexa Fluor 594 and Alexa Fluor 647.<br>The values you mentioned are indeed called Channel Description: DAPI1, YFP, ASIC1, Syntaxin1A, and as such are not included in the current OME-XML model.<br><br>We have fixed the code (<a href="https://github.com/openmicroscopy/bioformats/pull/1213">https://github.com/openmicroscopy/bioformats/pull/1213</a>) and values for all the channels will appear in the OriginalMetadata, so instead of:<br><br>"Experiment|AcquisitionBlock|RegionsSetup|TilesSetup|MultiTrackSetup|Track|Channel|Description: Syntaxin1"<br><br>you should get now:<br><br>Experiment|AcquisitionBlock|RegionsSetup|TilesSetup|MultiTrackSetup|Track|Channel|Description #1: DAPI1<br>Experiment|AcquisitionBlock|RegionsSetup|TilesSetup|MultiTrackSetup|Track|Channel|Description #2: YFP<br>Experiment|AcquisitionBlock|RegionsSetup|TilesSetup|MultiTrackSetup|Track|Channel|Description #3: ASIC1<br>Experiment|AcquisitionBlock|RegionsSetup|TilesSetup|MultiTrackSetup|Track|Channel|Description #4: Syntaxin1A<br><br>I hope that helps you proceed with your analysis workflow.<br><br>Regards,<br>Emil</div><div><br></div><div><br></div><br class="Apple-interchange-newline">
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