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<p class="MsoNormal">Hi,<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">I’ve just installed a new machine with Omero 5 and Ice 3.5.1, but I’m having trouble starting Omero.<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal">I am seeing the following errors in the “master.err” log file. Can anyone give me any pointers as to what I might be missing?<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt">Exception in thread "main" java.lang.NoClassDefFoundError: ome.services.blitz.Entry<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.lang.Class.initializeClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt">Caused by: java.lang.ClassNotFoundException: sun.misc.SignalHandler not found in gnu.gcj.runtime.SystemClassLoader{urls=[file:lib/server/blitz.jar], parent=gnu.gcj.runtime.ExtensionClassLoader{urls=[],
parent=null}}<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.net.URLClassLoader.findClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.lang.ClassLoader.loadClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.lang.ClassLoader.loadClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.lang.Class.initializeClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt">Exception in thread "main" java.lang.NoClassDefFoundError: ome.services.blitz.Entry<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.lang.Class.initializeClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt">Caused by: java.lang.ClassNotFoundException: sun.misc.SignalHandler not found in gnu.gcj.runtime.SystemClassLoader{urls=[file:lib/server/blitz.jar], parent=gnu.gcj.runtime.ExtensionClassLoader{urls=[],
parent=null}}<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.net.URLClassLoader.findClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.lang.ClassLoader.loadClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.lang.ClassLoader.loadClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.lang.Class.initializeClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt">-! 04/07/14 15:01:14.032 OMERO.Glacier2: warning: unable to contact permissions verifier `BlitzVerifier@BlitzAdapters'<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> Reference.cpp:1663: Ice::NoEndpointException:<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> no suitable endpoint available for proxy `BlitzVerifier -t -e 1.1 @ BlitzAdapters'<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt">-! 04/07/14 15:01:14.033 OMERO.Glacier2: warning: unable to contact session manager `BlitzManager@BlitzAdapters'<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> Reference.cpp:1663: Ice::NoEndpointException:<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> no suitable endpoint available for proxy `BlitzManager -t -e 1.1 @ BlitzAdapters'<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt">Exception in thread "main" java.lang.NoClassDefFoundError: ome.services.blitz.Entry<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.lang.Class.initializeClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt">Caused by: java.lang.ClassNotFoundException: sun.misc.SignalHandler not found in gnu.gcj.runtime.SystemClassLoader{urls=[file:lib/server/blitz.jar], parent=gnu.gcj.runtime.ExtensionClassLoader{urls=[],
parent=null}}<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.net.URLClassLoader.findClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.lang.ClassLoader.loadClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.lang.ClassLoader.loadClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal" style="margin-left:36.0pt"><span style="font-size:9.0pt"> at java.lang.Class.initializeClass(libgcj.so.10)<o:p></o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><br>
Thanks<o:p></o:p></p>
<p class="MsoNormal">John<o:p></o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal"><o:p> </o:p></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><b><span style="font-size:10.0pt;font-family:"Arial","sans-serif";color:#4F81BD;mso-fareast-language:EN-GB">-------------------------------------------------------------------------------------------------------------------------------------------- </span></b><span style="color:#0F126F;mso-fareast-language:EN-GB"><o:p></o:p></span></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><b><span style="font-family:"Arial","sans-serif";color:#548DD4;mso-fareast-language:EN-GB">John Webber<br>
</span></b><span style="color:#1F497D;mso-fareast-language:EN-GB">Computing and Information Services</span><span style="color:#0F126F;mso-fareast-language:EN-GB"><o:p></o:p></span></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><span style="color:#1F497D;mso-fareast-language:EN-GB">NBI Partnership Ltd</span><span style="color:#0F126F;mso-fareast-language:EN-GB"><o:p></o:p></span></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><span style="color:#1F497D;mso-fareast-language:EN-GB">Norwich Research park</span><span style="color:#0F126F;mso-fareast-language:EN-GB"><o:p></o:p></span></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><span style="color:#1F497D;mso-fareast-language:EN-GB">Colney Lane</span><span style="color:#0F126F;mso-fareast-language:EN-GB"><o:p></o:p></span></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><span style="color:#1F497D;mso-fareast-language:EN-GB">Norwich</span><span style="color:#0F126F;mso-fareast-language:EN-GB"><o:p></o:p></span></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><span style="color:#1F497D;mso-fareast-language:EN-GB">NR4 7UH</span><span style="color:#0F126F;mso-fareast-language:EN-GB"><o:p></o:p></span></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><span style="color:#1F497D;mso-fareast-language:EN-GB"> </span><span style="color:#0F126F;mso-fareast-language:EN-GB"><o:p></o:p></span></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><span style="color:#1F497D;mso-fareast-language:EN-GB">E-Mail:</span><span style="mso-fareast-language:EN-GB">
</span><span style="color:#1F497D;mso-fareast-language:EN-GB"><a href="mailto:john.webber@nbi.ac.uk"><span style="color:blue">john.webber@nbi.ac.uk</span></a></span><span style="color:#0F126F;mso-fareast-language:EN-GB"><o:p></o:p></span></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><span style="color:#1F497D;mso-fareast-language:EN-GB">Web:</span><span style="mso-fareast-language:EN-GB">
</span><span style="color:#1F497D;mso-fareast-language:EN-GB"> <a href="http://www.nbi.ac.uk/">
<span style="color:blue">http://www.nbi.ac.uk</span></a></span><span style="color:#0F126F;mso-fareast-language:EN-GB"><o:p></o:p></span></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><span style="color:#1F497D;mso-fareast-language:EN-GB">Tel:</span><span style="mso-fareast-language:EN-GB">
</span><span style="color:#1F497D;mso-fareast-language:EN-GB"> +44(0)1603 450 818<o:p></o:p></span></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><span style="color:#1F497D;mso-fareast-language:EN-GB"><o:p> </o:p></span></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><span style="color:#1F497D;mso-fareast-language:EN-GB">Helpdesk (Tel): 1234</span><span style="mso-fareast-language:EN-GB">
</span><span style="color:#1F497D;mso-fareast-language:EN-GB"> HPC Support (Web):</span><span style="mso-fareast-language:EN-GB">
</span><span style="color:#1F497D;mso-fareast-language:EN-GB"> <a href="http://hpc.nbi.ac.uk/">
<span style="color:blue">http://hpc.nbi.ac.uk</span></a> (NBI internal)<o:p></o:p></span></p>
<p class="MsoNormal" style="line-height:12.0pt;background:white"><span style="color:#1F497D;mso-fareast-language:EN-GB"> HPC Support (Tel):</span><span style="mso-fareast-language:EN-GB">
</span><span style="color:#1F497D;mso-fareast-language:EN-GB"> 2003 (NBI internal)<o:p></o:p></span></p>
<p class="MsoNormal"><span style="color:#1F497D;mso-fareast-language:EN-GB"> </span><span style="color:#0F126F;mso-fareast-language:EN-GB"><o:p></o:p></span></p>
<p class="MsoNormal"><i><span style="color:#1F497D;mso-fareast-language:EN-GB">The NBI Partnership Ltd provides non-scientific services to the Institute of Food Research, the John Innes Centre, The Genome Analysis Centre and The Sainsbury Laboratory</span></i><span style="color:#0F126F;mso-fareast-language:EN-GB"><o:p></o:p></span></p>
<p class="MsoNormal"><o:p> </o:p></p>
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