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Hi Tri,
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<div>Thanks for reporting this issue . According to the Bio-Formats 5.0.0 documentation at</div>
<div><a href="http://www.openmicroscopy.org/site/support/bio-formats5/formats/volocity-metadata.html">http://www.openmicroscopy.org/site/support/bio-formats5/formats/volocity-metadata.html</a></div>
<div>the metadata fields you are looking for to are not yet supported by the Bio-Formats</div>
<div>Volocity reader.</div>
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<div>To help you further, it would be very much appreciated if you could upload on of your Volocity</div>
<div>files to:</div>
<div><a href="http://qa.openmicroscopy.org.uk/qa/upload">http://qa.openmicroscopy.org.uk/qa/upload</a></div>
<div>Additionally, if you could supply us the expected time intervals as well, that would be extremely</div>
<div>helpful.</div>
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<div>Best regards,</div>
<div>Sebastien</div>
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<div>On 20 Mar 2014, at 18:12, Tri Thanh Pham <<a href="mailto:t.pham@unibas.ch">t.pham@unibas.ch</a>> wrote:</div>
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<blockquote type="cite">Hi Sebastien,<br>
<br>
I am quiet new to Bio-Formats in Matlab and I have a bit of a problem in extracting the time interval from the OME metadata when loading .mvd2 file into matlab. When I try to extract the time interval using the following command: TimeInterval= double(omeMeta.getPixelsTimeIncrement(0));<br>
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It return [ ]. I get the same result when I use double(omeMeta.getPlaneDeltaT(0,0)). Can you please suggest how can I extract the time interval from this mvd2 file. Note that when I use volocity software to load this mvd2 file, it gives the correct value, which
mean that the metadata does contain the time interval.<br>
<br>
Regards<br>
Tri<br>
<br>
Dr. Tri Thanh Pham<br>
Postdoctoral Research Fellow<br>
Biozentrum, University of Basel<br>
Klingelbergstrasse 50 / 70<br>
4056 Basel, Switzerland<br>
Phone: +41 61 267 14 83</blockquote>
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<div>Dr Sébastien Besson</div>
<div>Open Microscopy Environment / Harvard Medical School</div>
<div>Wellcome Trust Centre for Gene Regulation and Expression,</div>
<div>College of Life Sciences, University of Dundee, Dow Street,</div>
<div>Dundee DD1 5EH Scotland UK Tel: (01382) 386364</div>
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<span style="font-size:10pt;">The University of Dundee is a registered Scottish Charity, No: SC015096</span>
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