<div dir="ltr">Hi Ye,<div><br></div><div><div>> I got the following error message from LOCI while loading several</div><div>> NIKON .nd2 files. This happened with many files and</div><div>> trunk/lateast/stable version of LOCI, so that I hope you could help me</div>
<div>> sorting out the reason. My ImageJ (64-bit) is running on win-7 64-bit</div><div>> system.</div></div><div><br></div><div style>Thank you for the bug report. This issue may already have a fix in the works; I am not sure. I am CCing the ome-users list in this reply, to bring the rest of the OME team into the discussion.</div>
<div style><br></div><div style><div>> Could you please provide me a FTP address to upload the nd2 file,</div><div>> since the smallest one is ~600M?</div><div><br></div><div style>I will send you FTP server credentials in a separate mail.</div>
<div style><br></div>Regards,</div><div style>Curtis</div></div><div class="gmail_extra"><br><br><div class="gmail_quote">On Sun, Mar 17, 2013 at 12:25 AM, <span dir="ltr"><<a href="mailto:yechen@swin.edu.au" target="_blank">yechen@swin.edu.au</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0 0 0 .8ex;border-left:1px #ccc solid;padding-left:1ex">Ye Chen sent a message using the contact form at <a href="http://loci.wisc.edu/contact" target="_blank">http://loci.wisc.edu/contact</a>.<br>
<br>
Hi,<br>
<br>
I got the following error message from LOCI while loading several NIKON .nd2 files. This happened with many files and trunk/lateast/stable version of LOCI, so that I hope you could help me sorting out the reason. My ImageJ (64-bit) is running on win-7 64-bit system. Could you please provide me a FTP address to upload the nd2 file, since the smallest one is ~600M?<br>
<br>
Best regards,<br>
<br>
Ye<br>
<br>
Ye Chen, Ph.D. H34<br>
Centre for Micro-Photonics<br>
Faculty of Engineering and Industrial Sciences<br>
Swinburne University of Technology<br>
1 Alfred St. Hawthorn<br>
Victoria 3122, Australia<br>
(CRICOS Provider 00111D)<br>
Ph <a href="tel:%2B61-3-9214-5649" value="+61392145649" target="_blank">+61-3-9214-5649</a><br>
<br>
<br>
java.lang.<u></u>StringIndexOutOfBoundsExceptio<u></u>n: String index out of range: -9<br>
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at java.lang.String.substring(<u></u>String.java:1937)<br>
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at <a href="http://loci.formats.in" target="_blank">loci.formats.in</a>.<u></u>NativeND2Reader.initFile(<u></u>NativeND2Reader.java:490)<br>
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at loci.formats.FormatReader.<u></u>setId(FormatReader.java:1178)<br>
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at loci.formats.DelegateReader.<u></u>setId(DelegateReader.java:259)<br>
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at loci.plugins.in.ImportProcess.<u></u>initializeFile(ImportProcess.<u></u>java:482)<br>
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at loci.plugins.in.ImportProcess.<u></u>execute(ImportProcess.java:<u></u>146)<br>
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at loci.plugins.in.Importer.<u></u>showDialogs(Importer.java:141)<br>
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at loci.plugins.in.Importer.run(<u></u>Importer.java:79)<br>
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at loci.plugins.LociImporter.run(<u></u>LociImporter.java:81)<br>
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at ij.IJ.runUserPlugIn(IJ.java:<u></u>183)<br>
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at ij.IJ.runPlugIn(IJ.java:150)<br>
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at ij.Executer.runCommand(<u></u>Executer.java:127)<br>
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at ij.Executer.run(Executer.java:<u></u>64)<br>
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at ij.IJ.run(IJ.java:249)<br>
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at ij.IJ.run(IJ.java:227)<br>
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at ij.macro.Functions.doRun(<u></u>Functions.java:581)<br>
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at ij.macro.Functions.doFunction(<u></u>Functions.java:82)<br>
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at ij.macro.Interpreter.<u></u>doStatement(Interpreter.java:<u></u>203)<br>
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at ij.macro.Interpreter.doBlock(<u></u>Interpreter.java:526)<br>
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at ij.macro.Interpreter.runMacro(<u></u>Interpreter.java:130)<br>
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at ij.macro.MacroRunner.run(<u></u>MacroRunner.java:143)<br>
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at java.lang.Thread.run(Thread.<u></u>java:619)<br>
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</blockquote></div><br></div>