<div dir="ltr">Hi Daniel,<div><br></div><div class="gmail_extra"><div class="gmail_extra">> I have not heard from you in a while. Just to let you know the update</div><div class="gmail_extra">> did not work and still when I try to export an ics stack and separate</div>
<div class="gmail_extra">> the stack into different files each one a separate time point, the</div><div class="gmail_extra">> first time point is correct and then the following ones always have</div><div class="gmail_extra">
> n+1 frames instead of have just the single time point.</div><div><br></div><div style>Sorry for the delay in reply. I do not know the status of your problem, so am forwarding your message back to the ome-users list, so someone else can comment.</div>
<div style><br></div><div style>Regards,<br>Curtis</div><div style><br></div><br><div class="gmail_quote">On Wed, Mar 6, 2013 at 3:35 AM, Daniel Martins <span dir="ltr"><<a href="mailto:daniel.martins@oncology.ox.ac.uk" target="_blank">daniel.martins@oncology.ox.ac.uk</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex">
<div>
<div style="direction:ltr;font-size:12pt;font-family:'Times New Roman'">
Dear Curtis,<br>
<br>
I have not heard from you in a while. Just to let you know the update did not work and still when I try to export an ics stack and separate the stack into different files each one a separate time point, the first time point is correct and then the following
ones always have n+1 frames instead of have just the single time point.<div class="im"><br>
<br>
Best,<br>
<div><br>
<div style="font-family:Tahoma;font-size:13px">
<div><font face="Tahoma">
<div><font face="Times New Roman" size="3">Daniel Martins</font></div>
<div><font face="times new roman" size="3">DPhil Student</font></div>
<div><font face="Times New Roman" size="3">Gray Institute for Radiation Oncology & Biology</font></div>
<div><font face="Times New Roman" size="3">Department of Oncology</font></div>
<div><font face="Times New Roman" size="3">University of Oxford</font></div>
<div><span><span><font face="Times New Roman" size="3">Old Road Campus Research Building, Off Roosevelt Drive</font></span></span></div>
<div><font size="3"><span><font face="Times New Roman"><span>Oxford</span>,
<span>OX3 7DQ</span> </font></span></font></div>
<div><font size="3"><font face="Times New Roman"><span>Phone: <a href="tel:%2B441865%20617377" value="+441865617377" target="_blank">+441865 617377</a><br>
</span></font></font></div>
<font size="3"></font><span><span><span></span></span></span>
<div><font face="Times New Roman" size="3">Email: </font><a href="mailto:daniel.martins@oncology.ox.ac.uk" target="_blank"><font face="Times New Roman" size="3">daniel.martins@oncology.ox.ac.uk</font></a></div>
</font></div>
</div>
</div>
</div><div style="font-size:16px;font-family:'Times New Roman'">
<hr>
<div style="direction:ltr"><font color="#000000" face="Tahoma"><b>From:</b> <a href="mailto:ctrueden.wisc@gmail.com" target="_blank">ctrueden.wisc@gmail.com</a> [<a href="mailto:ctrueden.wisc@gmail.com" target="_blank">ctrueden.wisc@gmail.com</a>] on behalf of Curtis Rueden [<a href="mailto:ctrueden@wisc.edu" target="_blank">ctrueden@wisc.edu</a>]<br>
<b>Sent:</b> Tuesday, February 19, 2013 7:39 PM<br>
<b>To:</b> Daniel Martins<br>
<b>Cc:</b> OME-users mailing list<br>
<b>Subject:</b> Re: [Software Feedback] LOCI plugin bug<br>
</font><br>
</div><div><div class="h5">
<div></div>
<div>
<div dir="ltr">Hi Daniel,
<div><br>
<div class="gmail_extra">
<div class="gmail_extra">> When you export a time series let's assume with 5 time points, the</div>
<div class="gmail_extra">> first time point is exported correctly, but then the following ones</div>
<div class="gmail_extra">> have an issue.</div>
<div><br>
</div>
<div>Please update your Fiji to the latest version (Help > Update Fiji) and try again. If the problem still occurs, let us know. In that case though, we may need a test file or macro; you can upload one using the Help > Upload Sample Image command
if needed.</div>
<div><br>
</div>
<div>Regards,</div>
<div>Curtis</div>
<div class="gmail_extra"><br>
</div>
<br>
<div class="gmail_quote">On Tue, Feb 12, 2013 at 10:14 AM, <span dir="ltr"><<a href="mailto:daniel.martins@oncology.ox.ac.uk" target="_blank">daniel.martins@oncology.ox.ac.uk</a>></span> wrote:<br>
<blockquote class="gmail_quote" style="margin:0px 0px 0px 0.8ex;border-left-width:1px;border-left-color:rgb(204,204,204);border-left-style:solid;padding-left:1ex">
Dear all, I have been using your LOCI plugin to export some ics/ids time-series stacks using FIJI. I have noticed there is a bug on this feature. When you export a time series let's assume with 5 time points, the first time point is exported correctly, but
then the following ones have an issue. For example time-point 3 instead of being exported as a single frame, is exported as an ics stack with 3 frames, 2 empty frames and the last one is the actual single frame you would want to be exported to begin with.
In summary, each time-point is exported as a stack with a number of frames equal to the time point number. This bug only seems to occur for ics files. If you could help me and look into this it would be greatly appreciated.<br>
<br>
All the best,<br>
<br>
Daniel Martins<br>
</blockquote>
</div>
<br>
</div>
</div>
</div>
</div>
</div></div></div>
</div>
</div>
</blockquote></div><br></div></div>