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Hi Oscar,
<div><br>
</div>
<div>sorry for the delay.</div>
<div><br>
<div>
<div>On 6 Nov 2012, at 19:28, Oscar wrote:</div>
<br>
<blockquote type="cite">
<div class="gmail_quote">Hi,<br>
<br>
I followed the walk through to install omero server 4.4 in Mac Lion<br>
using homebrew.<br>
(<a href="http://www.openmicroscopy.org/site/support/omero4/sysadmins/unix/server-install-homebrew.html" target="_blank">http://www.openmicroscopy.org/site/support/omero4/sysadmins/unix/server-install-homebrew.html</a>)<br>
All the steps up to ./omero_homebrew.sh are done. However when I was<br>
trying to install omero using "brew install omero", it says "you must<br>
brew install git". But git was already installed, because when I did<br>
"brew install git", it said "git-1.8.0 already installed". Since it<br>
doesn't let me install omero with brew, I had to install it manually.<br>
</div>
</blockquote>
<div><br>
</div>
<div>That is surprising indeed. Here are a couple of questions:</div>
<div>- where is brew installed i.e. what is the output of `which -a brew` and</div>
<div>`brew --prefix`?</div>
<div>- which packages are installed, i.e what is the output of `brew list`?</div>
<br>
<blockquote type="cite">
<div class="gmail_quote">After I compiled Omero, I tried to run the executable "omero" under<br>
/dist/bin and python suddenly crashed "Fatal Python error: Interpreter<br>
not initialized (version mismatch?)". I installed python 2.7 with<br>
brew. It seemed this error has to do with Ice. I installed Ice 3.4 by<br>
just downloading the precompiled Ice3.4 tar ball from omero website,<br>
unzip it and add the environment variables accordingly including<br>
ICE_HOME, etc. I remember seeing it somewhere Ice 3.4 might not be<br>
compatible with OSX 10.7. Do I have to download Ice-3.3 instead? How<br>
do I fix this problem?<br>
</div>
</blockquote>
<div><br>
</div>
<div>Looks more like a pure Python issue here. What is the output of `<span class="Apple-style-span" style="font-family:monospace">which python` and</span></div>
<div><span class="Apple-style-span" style="font-family:monospace">`python -version` ? </span>And do you have the Homebrew Python in your PATH and</div>
<div>PYTHONPATH?</div>
<div><br>
</div>
<div>Re Ice, if you followed the Homebrew walkthrough instructions, Ice 3.3 should have been</div>
<div>installed as part of the dependencies (`brew --prefix zeroc-ice33`). We are still having </div>
<div>issues when installing OMERO with Ice 3.4 using Homebrew. This is definitely on our todo list.</div>
<div><br>
</div>
Sebastien</div>
<div><br>
<blockquote type="cite">
<div class="gmail_quote"><span class="HOEnZb"><font color="#888888"><br>
~O </font></span></div>
<br>
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</blockquote>
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<br>
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<div style="word-wrap:break-word">
<div>Dr Sébastien Besson</div>
<div>Open Microscopy Environment / Harvard Medical School</div>
<div>Wellcome Trust Centre for Gene Regulation and Expression,</div>
<div>College of Life Sciences, University of Dundee, Dow Street,</div>
<div>Dundee DD1 5EH Scotland UK Tel: (01382) 386364</div>
</div>
</span></div>
</div>
<br>
</div>
<br>
The University of Dundee is a registered Scottish Charity, No: SC015096
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