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<p class=MsoNormal>Hi,<o:p></o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>I have Centos 5.3 installed and had OMERO 4.0.3 running ok
with mod python production environment. I then upgraded to omero ver 4.1 and
now I am getting the following problems.<o:p></o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>When trying to attach to server via the web my browser now
shows the following text …..<o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>Mod_python
error: "PythonHandler django.core.handlers.modpython"<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>Traceback
(most recent call last):<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
File "/usr/lib64/python2.4/site-packages/mod_python/apache.py", line
299, in HandlerDispatch<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
result = object(req)<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
File
"/home/David/Downloads/omero_dist/lib/python/django/core/handlers/modpython.py",
line 222, in handler<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
return ModPythonHandler()(req)<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
File
"/home/David/Downloads/omero_dist/lib/python/django/core/handlers/modpython.py",
line 185, in __call__<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
self.load_middleware()<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
File
"/home/David/Downloads/omero_dist/lib/python/django/core/handlers/base.py",
line 31, in load_middleware<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
for middleware_path in settings.MIDDLEWARE_CLASSES:<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
File "/home/David/Downloads/omero_dist/lib/python/django/conf/__init__.py",
line 28, in __getattr__<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
self._import_settings()<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
File
"/home/David/Downloads/omero_dist/lib/python/django/conf/__init__.py",
line 59, in _import_settings<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
self._target = Settings(settings_module)<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
File "/home/David/Downloads/omero_dist/lib/python/django/conf/__init__.py",
line 92, in __init__<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
mod = __import__(self.SETTINGS_MODULE, {}, {}, [''])<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
File
"/home/David/Downloads/omero_dist/lib/python/omeroweb/settings.py",
line 178, in ?<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
filemode='a')<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
File "/usr/lib64/python2.4/logging/__init__.py", line 1218, in
basicConfig<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
hdlr = FileHandler(filename, mode)<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
File "/usr/lib64/python2.4/logging/__init__.py", line 757, in
__init__<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>
stream = open(filename, mode)<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New"'>IOError:
[Errno 13] Permission denied: '/home/David/Downloads/omero_dist/lib/python/omeroweb/../../../var/log/OMEROweb.log'<o:p></o:p></span></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>I used to be able to connect with the desktop clients but
now this is no longer working either. I don’t think that the omero is
starting properly.<o:p></o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>Does anyone have any advice on troubleshooting this problem?
I seem to be going around in circles (ever increasing ones!) <o:p></o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>Regards<o:p></o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Times","serif";
color:#00127D'> </span><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'>
<o:p></o:p></span></p>
<div>
<p class=MsoNormal><span style='font-size:8.5pt;font-family:"Times","serif";
color:#00127D'>David Strachan <o:p></o:p></span></p>
<div>
<p class=MsoNormal><span style='font-size:8.5pt;font-family:"Times","serif";
color:#00127D'>The Beatson Institute for Cancer Research<o:p></o:p></span></p>
</div>
</div>
<div>
<p class=MsoNormal><span style='font-size:8.5pt;font-family:"Times","serif";
color:#00127D'>Glasgow G61 1BD</span><span style='font-size:10.0pt;
font-family:"Arial","sans-serif"'><o:p></o:p></span></p>
</div>
<div>
<p class=MsoNormal><span style='font-size:8.5pt;font-family:Wingdings;
color:#0F3564'>(</span><span style='font-size:11.5pt;font-family:"Times","serif";
color:#0F3564'> </span><b><span style='font-size:8.5pt;font-family:"Tahoma","sans-serif";
color:#0F3564'>Direct Line</span></b><span style='font-size:10.0pt;font-family:
"Arial","sans-serif"'> </span><span style='font-size:8.5pt;font-family:
"Times","serif";color:#00127D'>+44 (0) 141 330 6872</span><span
style='font-size:10.0pt;font-family:"Arial","sans-serif"'><o:p></o:p></span></p>
</div>
<div>
<p class=MsoNormal><span style='font-size:8.5pt;font-family:Wingdings;
color:#0F3564'>(</span><span style='font-size:11.5pt;font-family:"Times","serif";
color:#0F3564'> </span><b><span style='font-size:8.5pt;font-family:"Tahoma","sans-serif";
color:#0F3564'>Fax </span></b><b><span
style='font-size:8.5pt;font-family:"Tahoma","sans-serif";color:#0F3564'> </span></b><span
style='font-size:8.5pt;font-family:"Times","serif";color:#00127D'>+44 (0) 141
942 6521</span><span style='font-size:10.0pt;font-family:"Arial","sans-serif"'><o:p></o:p></span></p>
</div>
<p class=MsoNormal><span style='font-size:8.5pt;font-family:Wingdings;
color:#0F3564'>*</span><b><span style='font-size:8.5pt;font-family:"Tahoma","sans-serif";
color:#0F3564'> </span></b><b><span style='font-size:8.5pt;font-family:
"Tahoma","sans-serif";color:#0F3564'>E-mail <a
href="mailto:d.strachan@beatson.gla.ac.uk" target="_blank"><span
style='color:blue'>d.strachan@beatson.gla.ac.uk</span></a></span></b><o:p></o:p></p>
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