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Hi Veronique,<div><br></div><div>We would like to be able to import all this metadata if possible.</div><div><br></div><div>However, it is quite tricky to map the data in the LIF file to our OME data model. </div><div><br></div><div>For example, in a sample LIF file I'm looking at (with ImageJ and BioFormats plugin), there appears to be only 1 pin-hole size, whereas our model requires a pin-hole size for each channel. </div><div><br></div><div>One problem we have is that we don't know how the LIF files are read and displayed by the Leica software. </div><div>(Do you know of any LIF viewing software that is available to download?)</div><div><br></div><div>You could help us a lot by sending us any sample LIF files you have, together with a list of all the metadata you want to view from the files. </div><div>Alternatively, if you could also take a screen-shot of what the files look like, and what metadata is displayed in the Leica software, that would allow us to work out how to read this metadata from the file. </div><div><br></div><div>If you want details of how to upload sample files to our image repository, please e-mail melissa <a href="mailto:melissa@glencoesoftware.com">melissa@glencoesoftware.com</a></div><div><br></div><div> Many thanks,</div><div><br></div><div> Will. </div><div><br></div><div><br><div><div>On 20 Jul 2009, at 08:36, V. Mallouh wrote:</div><br class="Apple-interchange-newline"><blockquote type="cite"> Hello,<br> <br> We are importing LIF files in Omero 4.0.3 : it would be very useful to have original metadata (Laser wavelength, Pinhole, PMT, SP Mirror Channel, ...) available in Insight. <br> Is it planned to import these informations in Omero?<br> <br> Best regards,<br> <br> <font color="#666666">Véronique Mallouh</font><font color="#666666"><br> </font><font color="#666666">IGBMC<br> </font><font color="#666666">1 Rue Laurent Fries<br> 67404 Illkirch Cedex<br> France<br> <a moz-do-not-send="true" class="moz-txt-link-abbreviated" href="mailto:mallouh@igbmc.u-strasbg.fr">mallouh@igbmc.fr</a><br> <br> <br> </font><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">_______________________________________________</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">ome-users mailing list</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><a href="mailto:ome-users@lists.openmicroscopy.org.uk">ome-users@lists.openmicroscopy.org.uk</a></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><a href="http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users">http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users</a></div> </blockquote></div><br><div> <span class="Apple-style-span" style="border-collapse: separate; color: rgb(0, 0, 0); font-family: Helvetica; font-size: 12px; font-style: normal; font-variant: normal; font-weight: normal; letter-spacing: normal; line-height: normal; orphans: 2; text-align: auto; text-indent: 0px; text-transform: none; white-space: normal; widows: 2; word-spacing: 0px; -webkit-border-horizontal-spacing: 0px; -webkit-border-vertical-spacing: 0px; -webkit-text-decorations-in-effect: none; -webkit-text-size-adjust: auto; -webkit-text-stroke-width: 0; "><div>William Moore</div><div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Division of Gene Regulation and Expression</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">College of Life Sciences</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">University of Dundee</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Scotland</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">DD1 5PH</div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; "><br></div><div style="margin-top: 0px; margin-right: 0px; margin-bottom: 0px; margin-left: 0px; ">Tel 01382 386364</div></div></span> </div><br></div></body></html>