/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/bin/run.sh: line 89: ulimit: open files: cannot modify limit: Invalid argument run.sh: Could not set maximum file descriptor limit: unlimited ========================================================================= JBoss Bootstrap Environment JBOSS_HOME: /Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA JAVA: java JAVA_OPTS: -Dprogram.name=run.sh -Xms128m -Xmx512m -Dsun.rmi.dgc.client.gcInterval=3600000 -Dsun.rmi.dgc.server.gcInterval=3600000 -XX:MaxPermSize=128M -Djava.awt.headless=true CLASSPATH: /Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/bin/run.jar ========================================================================= 12:00:07,406 INFO [Server] Starting JBoss (MX MicroKernel)... 12:00:07,407 INFO [Server] Release ID: JBoss [Trinity] 4.2.1.GA (build: SVNTag=JBoss_4_2_1_GA date=200707131605) 12:00:07,413 INFO [Server] Home Dir: /Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA 12:00:07,413 INFO [Server] Home URL: file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/ 12:00:07,414 INFO [Server] Patch URL: null 12:00:07,414 INFO [Server] Server Name: default 12:00:07,414 INFO [Server] Server Home Dir: /Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default 12:00:07,414 INFO [Server] Server Home URL: file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/ 12:00:07,414 INFO [Server] Server Log Dir: /Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/log 12:00:07,415 INFO [Server] Server Temp Dir: /Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp 12:00:07,415 INFO [Server] Root Deployment Filename: jboss-service.xml 12:00:07,669 INFO [ServerInfo] Java version: 1.5.0_13,Apple Inc. 12:00:07,670 INFO [ServerInfo] Java VM: Java HotSpot(TM) Client VM 1.5.0_13-119,Apple Inc. 12:00:07,670 INFO [ServerInfo] OS-System: Mac OS X 10.5.1,i386 12:00:08,030 INFO [Server] Core system initialized 12:00:09,932 INFO [WebService] Using RMI server codebase: http://dyn-17-156.uwnet.wisc.edu:8083/ 12:00:09,935 INFO [Log4jService$URLWatchTimerTask] Configuring from URL: resource:jboss-log4j.xml 12:00:10,421 INFO [TransactionManagerService] JBossTS Transaction Service (JTA version) - JBoss Inc. 12:00:10,421 INFO [TransactionManagerService] Setting up property manager MBean and JMX layer 12:00:10,575 INFO [TransactionManagerService] Starting recovery manager 12:00:10,651 INFO [TransactionManagerService] Recovery manager started 12:00:10,651 INFO [TransactionManagerService] Binding TransactionManager JNDI Reference 12:00:13,205 INFO [EJB3Deployer] Starting java:comp multiplexer 12:00:14,675 INFO [ServiceEndpointManager] jbossws-1.2.1.GA (build=200704151756) 12:00:15,870 INFO [AprLifecycleListener] The Apache Tomcat Native library which allows optimal performance in production environments was not found on the java.library.path: .:/Library/Java/Extensions:/System/Library/Java/Extensions:/usr/lib/java 12:00:15,936 INFO [Http11Protocol] Initializing Coyote HTTP/1.1 on http-0.0.0.0-8080 12:00:15,936 INFO [AjpProtocol] Initializing Coyote AJP/1.3 on ajp-0.0.0.0-8009 12:00:15,936 INFO [Catalina] Initialization processed in 234 ms 12:00:15,936 INFO [StandardService] Starting service jboss.web 12:00:15,938 INFO [StandardEngine] Starting Servlet Engine: JBossWeb/2.0.0.GA 12:00:15,994 INFO [Catalina] Server startup in 57 ms 12:00:16,086 INFO [TomcatDeployer] deploy, ctxPath=/, warUrl=.../deploy/jboss-web.deployer/ROOT.war/ 12:00:16,629 INFO [TomcatDeployer] deploy, ctxPath=/invoker, warUrl=.../deploy/http-invoker.sar/invoker.war/ 12:00:16,805 INFO [TomcatDeployer] deploy, ctxPath=/jbossws, warUrl=.../tmp/deploy/tmp61232jbossws-context-exp.war/ 12:00:16,915 INFO [TomcatDeployer] deploy, ctxPath=/jbossmq-httpil, warUrl=.../deploy/jms/jbossmq-httpil.sar/jbossmq-httpil.war/ 12:00:17,590 INFO [TomcatDeployer] deploy, ctxPath=/web-console, warUrl=.../deploy/management/console-mgr.sar/web-console.war/ 12:00:18,010 INFO [MailService] Mail Service bound to java:/Mail 12:00:18,162 INFO [RARDeployment] Required license terms exist, view META-INF/ra.xml in .../deploy/jboss-ha-local-jdbc.rar 12:00:18,207 INFO [RARDeployment] Required license terms exist, view META-INF/ra.xml in .../deploy/jboss-ha-xa-jdbc.rar 12:00:18,231 INFO [RARDeployment] Required license terms exist, view META-INF/ra.xml in .../deploy/jboss-local-jdbc.rar 12:00:18,266 INFO [RARDeployment] Required license terms exist, view META-INF/ra.xml in .../deploy/jboss-xa-jdbc.rar 12:00:18,312 INFO [RARDeployment] Required license terms exist, view META-INF/ra.xml in .../deploy/jms/jms-ra.rar 12:00:18,350 INFO [RARDeployment] Required license terms exist, view META-INF/ra.xml in .../deploy/quartz-ra.rar 12:00:18,594 INFO [QuartzResourceAdapter] start quartz!!! 12:00:18,651 INFO [SimpleThreadPool] Job execution threads will use class loader of thread: main 12:00:18,672 INFO [QuartzScheduler] Quartz Scheduler v.1.5.2 created. 12:00:18,675 INFO [RAMJobStore] RAMJobStore initialized. 12:00:18,675 INFO [StdSchedulerFactory] Quartz scheduler 'DefaultQuartzScheduler' initialized from default resource file in Quartz package: 'quartz.properties' 12:00:18,675 INFO [StdSchedulerFactory] Quartz scheduler version: 1.5.2 12:00:18,675 INFO [QuartzScheduler] Scheduler DefaultQuartzScheduler_$_NON_CLUSTERED started. 12:00:19,133 INFO [ConnectionFactoryBindingService] Bound ConnectionManager 'jboss.jca:service=DataSourceBinding,name=DefaultDS' to JNDI name 'java:DefaultDS' 12:00:19,343 INFO [A] Bound to JNDI name: queue/A 12:00:19,344 INFO [B] Bound to JNDI name: queue/B 12:00:19,345 INFO [C] Bound to JNDI name: queue/C 12:00:19,346 INFO [D] Bound to JNDI name: queue/D 12:00:19,348 INFO [ex] Bound to JNDI name: queue/ex 12:00:19,363 INFO [testTopic] Bound to JNDI name: topic/testTopic 12:00:19,364 INFO [securedTopic] Bound to JNDI name: topic/securedTopic 12:00:19,365 INFO [testDurableTopic] Bound to JNDI name: topic/testDurableTopic 12:00:19,368 INFO [testQueue] Bound to JNDI name: queue/testQueue 12:00:19,403 INFO [UILServerILService] JBossMQ UIL service available at : /0.0.0.0:8093 12:00:19,430 INFO [DLQ] Bound to JNDI name: queue/DLQ 12:00:19,540 INFO [ConnectionFactoryBindingService] Bound ConnectionManager 'jboss.jca:service=ConnectionFactoryBinding,name=JmsXA' to JNDI name 'java:JmsXA' 12:00:21,688 INFO [TomcatDeployer] deploy, ctxPath=/WebAdmin, warUrl=.../tmp/deploy/tmp61261WebAdmin-exp.war/ 12:00:23,345 INFO [TomcatDeployer] deploy, ctxPath=/jmx-console, warUrl=.../deploy/jmx-console.war/ 12:00:24,195 INFO [EARDeployer] Init J2EE application: file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/deploy/omero.ear 12:00:30,426 WARN [MainDeployer] Found non-jar deployer for server.jar: MBeanProxyExt[jboss.ejb3:service=EJB3Deployer] 12:00:34,603 INFO [ConnectionFactoryBindingService] Bound ConnectionManager 'jboss.jca:service=DataSourceBinding,name=omeroDS' to JNDI name 'java:omeroDS' 12:00:34,836 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateless.StatelessContainer 12:00:34,852 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=AdminImpl,service=EJB3 with dependencies: 12:00:35,075 INFO [EJBContainer] STARTED EJB: ome.logic.AdminImpl ejbName: AdminImpl 12:00:35,230 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateless.StatelessContainer 12:00:35,230 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=ConfigImpl,service=EJB3 with dependencies: 12:00:35,254 INFO [EJBContainer] STARTED EJB: ome.logic.ConfigImpl ejbName: ConfigImpl 12:00:35,297 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateless.StatelessContainer 12:00:35,297 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=LdapImpl,service=EJB3 with dependencies: 12:00:35,354 INFO [EJBContainer] STARTED EJB: ome.logic.LdapImpl ejbName: LdapImpl 12:00:35,389 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateless.StatelessContainer 12:00:35,390 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=PixelsImpl,service=EJB3 with dependencies: 12:00:35,410 INFO [EJBContainer] STARTED EJB: ome.logic.PixelsImpl ejbName: PixelsImpl 12:00:35,454 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateless.StatelessContainer 12:00:35,454 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=PojosImpl,service=EJB3 with dependencies: 12:00:35,517 INFO [EJBContainer] STARTED EJB: ome.logic.PojosImpl ejbName: PojosImpl 12:00:35,557 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateless.StatelessContainer 12:00:35,557 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=QueryImpl,service=EJB3 with dependencies: 12:00:35,593 INFO [EJBContainer] STARTED EJB: ome.logic.QueryImpl ejbName: QueryImpl 12:00:35,644 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateless.StatelessContainer 12:00:35,644 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=RenderingSettingsImpl,service=EJB3 with dependencies: 12:00:35,665 INFO [EJBContainer] STARTED EJB: ome.logic.RenderingSettingsImpl ejbName: RenderingSettingsImpl 12:00:35,704 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateless.StatelessContainer 12:00:35,704 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=RepositoryInfoImpl,service=EJB3 with dependencies: 12:00:35,728 INFO [EJBContainer] STARTED EJB: ome.logic.RepositoryInfoImpl ejbName: RepositoryInfoImpl 12:00:35,771 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateless.StatelessContainer 12:00:35,771 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=TypesImpl,service=EJB3 with dependencies: 12:00:35,800 INFO [EJBContainer] STARTED EJB: ome.logic.TypesImpl ejbName: TypesImpl 12:00:35,840 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateless.StatelessContainer 12:00:35,841 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=UpdateImpl,service=EJB3 with dependencies: 12:00:35,859 INFO [EJBContainer] STARTED EJB: ome.logic.UpdateImpl ejbName: UpdateImpl 12:00:35,894 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateful.StatefulContainer 12:00:35,897 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=JobBean,service=EJB3 with dependencies: 12:00:35,941 INFO [EJBContainer] STARTED EJB: ome.services.JobBean ejbName: JobBean 12:00:36,005 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateful.StatefulContainer 12:00:36,006 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=RawFileBean,service=EJB3 with dependencies: 12:00:36,026 INFO [EJBContainer] STARTED EJB: ome.services.RawFileBean ejbName: RawFileBean 12:00:36,068 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateful.StatefulContainer 12:00:36,069 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=RawPixelsBean,service=EJB3 with dependencies: 12:00:36,137 INFO [EJBContainer] STARTED EJB: ome.services.RawPixelsBean ejbName: RawPixelsBean 12:00:36,184 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateful.StatefulContainer 12:00:36,184 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=RenderingBean,service=EJB3 with dependencies: 12:00:36,269 INFO [EJBContainer] STARTED EJB: ome.services.RenderingBean ejbName: RenderingBean 12:00:36,295 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.stateful.StatefulContainer 12:00:36,295 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=ThumbnailBean,service=EJB3 with dependencies: 12:00:36,348 INFO [EJBContainer] STARTED EJB: ome.services.ThumbnailBean ejbName: ThumbnailBean 12:00:36,374 INFO [JmxKernelAbstraction] creating wrapper delegate for: org.jboss.ejb3.service.ServiceContainer 12:00:36,374 INFO [JmxKernelAbstraction] installing MBean: jboss.j2ee:ear=omero.ear,jar=server.jar,name=OmeroContextHook,service=EJB3 with dependencies: 12:00:36,680 INFO [EJBContainer] STARTED EJB: ome.services.jboss.OmeroContextHook ejbName: OmeroContextHook 12:00:36,748 INFO [ClassPathXmlApplicationContext] Refreshing org.springframework.context.support.ClassPathXmlApplicationContext@bbc655: display name [org.springframework.context.support.ClassPathXmlApplicationContext@bbc655]; startup date [Thu Feb 07 12:00:36 CST 2008]; root of context hierarchy 12:00:36,828 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/blitz.jar!/beanRefContext.xml] 12:00:36,901 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/client.jar!/beanRefContext.xml] 12:00:36,908 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/beanRefContext.xml] 12:00:36,915 INFO [DefaultListableBeanFactory] Overriding bean definition for bean 'placeholderConfig': replacing [Root bean: class [org.springframework.beans.factory.config.PropertyPlaceholderConfigurer]; scope=singleton; abstract=false; lazyInit=false; autowireCandidate=true; autowireMode=0; dependencyCheck=0; factoryBeanName=null; factoryMethodName=null; initMethodName=null; destroyMethodName=null; defined in URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/blitz.jar!/beanRefContext.xml]] with [Root bean: class [org.springframework.beans.factory.config.PropertyPlaceholderConfigurer]; scope=singleton; abstract=false; lazyInit=false; autowireCandidate=true; autowireMode=0; dependencyCheck=0; factoryBeanName=null; factoryMethodName=null; initMethodName=null; destroyMethodName=null; defined in URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/beanRefContext.xml]] 12:00:36,924 INFO [ClassPathXmlApplicationContext] Bean factory for application context [org.springframework.context.support.ClassPathXmlApplicationContext@bbc655]: org.springframework.beans.factory.support.DefaultListableBeanFactory@635c95 12:00:36,992 INFO [PropertyPlaceholderConfigurer] Loading properties file from class path resource [hibernate.properties] 12:00:36,993 INFO [PropertyPlaceholderConfigurer] Loading properties file from class path resource [omero.properties] 12:00:36,993 INFO [PropertyPlaceholderConfigurer] Loading properties file from class path resource [ejb.properties] 12:00:37,000 INFO [DefaultListableBeanFactory] Pre-instantiating singletons in org.springframework.beans.factory.support.DefaultListableBeanFactory@635c95: defining beans [placeholderConfig,OMERO.blitz,OMERO.client,ome.client,ome.client.internal,ome.client.test,ome.server]; root of factory hierarchy 12:00:37,010 INFO [OmeroContext] Refreshing ome.system.OmeroContext@66f7c5: display name [ome.system.OmeroContext@66f7c5]; startup date [Thu Feb 07 12:00:37 CST 2008]; root of context hierarchy 12:00:37,013 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from class path resource [ome/services/config-local.xml] 12:00:37,022 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from class path resource [ome/services/security.xml] 12:00:37,032 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from class path resource [ome/services/services.xml] 12:00:37,051 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.IAdmin.xml] 12:00:37,057 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.IAnalysis.xml] 12:00:37,062 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.ICompress.xml] 12:00:37,066 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.IConfig.xml] 12:00:37,071 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.ILdap.xml] 12:00:37,079 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.IPixels.xml] 12:00:37,088 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.IPojos.xml] 12:00:37,096 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.IQuery.xml] 12:00:37,101 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.IRenderingSettings.xml] 12:00:37,105 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.IRepositoryInfo.xml] 12:00:37,110 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.IScale.xml] 12:00:37,123 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.IThumb.xml] 12:00:37,129 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.ITypes.xml] 12:00:37,136 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.IUpdate.xml] 12:00:37,141 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.JobHandle.xml] 12:00:37,154 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.RawFileStore.xml] 12:00:37,159 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.api.RawPixelsStore.xml] 12:00:37,168 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.io.nio.OriginalFilesService.xml] 12:00:37,173 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.io.nio.PixelsService.xml] 12:00:37,178 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-ome.io.nio.ThumbnailService.xml] 12:00:37,182 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from URL [jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar!/ome/services/service-omeis.providers.re.RenderingEngine.xml] 12:00:37,188 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from class path resource [ome/services/hibernate.xml] 12:00:37,195 INFO [XmlBeanDefinitionReader] Loading XML bean definitions from class path resource [ome/services/in-container.xml] 12:00:37,201 INFO [OmeroContext] Bean factory for application context [ome.system.OmeroContext@66f7c5]: org.springframework.beans.factory.support.DefaultListableBeanFactory@79c3bb 12:00:37,266 INFO [PropertyPlaceholderConfigurer] Loading properties file from class path resource [hibernate.properties] 12:00:37,266 INFO [PropertyPlaceholderConfigurer] Loading properties file from class path resource [omero.properties] 12:00:37,267 INFO [PropertyPlaceholderConfigurer] Loading properties file from class path resource [local.properties] 12:00:37,267 INFO [PropertyPlaceholderConfigurer] Loading properties file from class path resource [ejb.properties] 12:00:37,291 INFO [DefaultListableBeanFactory] Pre-instantiating singletons in org.springframework.beans.factory.support.DefaultListableBeanFactory@79c3bb: defining beans [placeholderConfig,securitySystem,securityWiring,eventListeners,eventHandler,omeroInterceptor,securityFilter,ome.tools.spring.PostProcessInjector,dbPatchCheck,serverVersionCheck,upgradeCheck,managedService,managedStatefulService,serviceHandler,profile,bean,level1,level2,level3,stateful,binary,filesystem,queryFactory,internal:ome.services.util.OmeroAroundInvokeName,internal:ome.api.IAdmin,managed:ome.api.IAdmin,flushAuthenticationCachesMethod,flushAuthenticationCachesTrigger,ticket813WorkaroundScheduler,dummy,internal:ome.api.IAnalysis,managed:ome.api.IAnalysis,internal:ome.api.ICompress,internal:ome.api.IConfig,managed:ome.api.IConfig,internal:ome.api.ILdap,managed:ome.api.ILdap,ldapTemplate,contextSource,internal:ome.api.IPixels,managed:ome.api.IPixels,internal:ome.api.IPojos,managed:ome.api.IPojos,internal:ome.api.IQuery,managed:ome.api.IQuery,internal:ome.api.IRenderingSettings,managed:ome.api.IRenderingSettings,internal:ome.api.IRepositoryInfo,managed:ome.api.IRepositoryInfo,internal:ome.api.IScale,internal:ome.api.ThumbnailStore,managed:ome.api.ThumbnailStore,internal:ome.api.ITypes,managed:ome.api.ITypes,internal:ome.api.IUpdate,managed:ome.api.IUpdate,internal:ome.api.JobHandle,jobNotification,managed:ome.api.JobHandle,processManager,process-jobs-manual,process-jobs-async,process-jobs-every-30-seconds,scheduler,internal:ome.api.RawFileStore,managed:ome.api.RawFileStore,internal:ome.api.RawPixelsStore,managed:ome.api.RawPixelsStore,/OMERO/Files,/OMERO/Pixels,/OMERO/Thumbs,internal:omeis.providers.re.RenderingEngine,managed:omeis.providers.re.RenderingEngine,extendedMetadata,proxyHandler,sessionHandler,hibernateHandler,hibernateTemplate,sessionFactory,methodSecurity,hibernateProperties,transactionManager,transactionHandler,simpleJdbcTemplate,jdbcTemplate,dataSource]; root of factory hierarchy 12:00:37,594 INFO [Environment] Hibernate 3.2.5 12:00:37,597 INFO [Environment] loaded properties from resource hibernate.properties: {database.name=omero3, hibernate.show_sql=false, database.profile=psql, database.host=localhost, container.status=out-of-container, hibernate.jdbc.batch_size=0, hibernate.bytecode.use_reflection_optimizer=false} 12:00:37,598 INFO [Environment] Bytecode provider name : javassist 12:00:37,602 INFO [Environment] using JDK 1.4 java.sql.Timestamp handling 12:00:37,604 INFO [Configuration] configuring from url: jar:file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/common.jar!/hibernate.cfg.xml 12:00:37,668 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/Dichroic.hbm.xml 12:00:37,761 INFO [HbmBinder] Mapping class: ome.model.acquisition.Dichroic -> dichroic 12:00:37,786 INFO [Configuration] Reading mappings from resource : ome/model/results/NucleusEccentricity.hbm.xml 12:00:37,796 INFO [HbmBinder] Mapping class: ome.model.results.NucleusEccentricity -> nucleuseccentricity 12:00:37,800 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/ImagingEnvironment.hbm.xml 12:00:37,816 INFO [HbmBinder] Mapping class: ome.model.acquisition.ImagingEnvironment -> imagingenvironment 12:00:37,818 INFO [Configuration] Reading mappings from resource : ome/model/roi/RoiMap.hbm.xml 12:00:37,826 INFO [HbmBinder] Mapping class: ome.model.roi.RoiMap -> roimap 12:00:37,828 INFO [Configuration] Reading mappings from resource : ome/model/experiment/Experiment.hbm.xml 12:00:37,838 INFO [HbmBinder] Mapping class: ome.model.experiment.Experiment -> experiment 12:00:37,840 INFO [Configuration] Reading mappings from resource : ome/model/results/CellArea.hbm.xml 12:00:37,851 INFO [HbmBinder] Mapping class: ome.model.results.CellArea -> cellarea 12:00:37,853 INFO [Configuration] Reading mappings from resource : ome/model/roi/Roi5D.hbm.xml 12:00:37,864 INFO [HbmBinder] Mapping class: ome.model.roi.Roi5D -> roi5d 12:00:37,871 INFO [Configuration] Reading mappings from resource : ome/model/results/CellSolidity.hbm.xml 12:00:37,896 INFO [HbmBinder] Mapping class: ome.model.results.CellSolidity -> cellsolidity 12:00:37,899 INFO [Configuration] Reading mappings from resource : ome/model/enums/Immersion.hbm.xml 12:00:37,908 INFO [HbmBinder] Mapping class: ome.model.enums.Immersion -> immersion 12:00:37,910 INFO [Configuration] Reading mappings from resource : ome/model/uroi/Metadata.hbm.xml 12:00:37,918 INFO [HbmBinder] Mapping class: ome.model.uroi.Metadata -> metadata 12:00:37,920 INFO [Configuration] Reading mappings from resource : ome/model/uroi/DummyStatistics.hbm.xml 12:00:37,965 INFO [HbmBinder] Mapping joined-subclass: ome.model.uroi.DummyStatistics -> dummystatistics 12:00:37,966 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/StageLabel.hbm.xml 12:00:37,973 INFO [HbmBinder] Mapping class: ome.model.acquisition.StageLabel -> stagelabel 12:00:37,975 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/ObjectiveSettings.hbm.xml 12:00:37,982 INFO [HbmBinder] Mapping class: ome.model.acquisition.ObjectiveSettings -> objectivesettings 12:00:37,984 INFO [Configuration] Reading mappings from resource : ome/model/containers/CategoryImageLink.hbm.xml 12:00:37,991 INFO [HbmBinder] Mapping class: ome.model.containers.CategoryImageLink -> categoryimagelink 12:00:37,993 INFO [Configuration] Reading mappings from resource : ome/model/core/Pixels.hbm.xml 12:00:38,005 INFO [HbmBinder] Mapping class: ome.model.core.Pixels -> pixels 12:00:38,013 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYZtoXYLink.hbm.xml 12:00:38,022 INFO [HbmBinder] Mapping class: ome.model.uroi.XYZtoXYLink -> xyztoxylink 12:00:38,025 INFO [Configuration] Reading mappings from resource : ome/model/enums/OverlayType.hbm.xml 12:00:38,033 INFO [HbmBinder] Mapping class: ome.model.enums.OverlayType -> overlaytype 12:00:38,035 INFO [Configuration] Reading mappings from resource : ome/model/internal/Link.hbm.xml 12:00:38,042 INFO [HbmBinder] Mapping class: ome.model.internal.Link -> link 12:00:38,043 INFO [Configuration] Reading mappings from resource : ome/model/enums/ArcType.hbm.xml 12:00:38,059 INFO [HbmBinder] Mapping class: ome.model.enums.ArcType -> arctype 12:00:38,060 INFO [Configuration] Reading mappings from resource : ome/model/stats/StatsInfo.hbm.xml 12:00:38,069 INFO [HbmBinder] Mapping class: ome.model.stats.StatsInfo -> statsinfo 12:00:38,071 INFO [Configuration] Reading mappings from resource : ome/model/display/ChannelBinding.hbm.xml 12:00:38,079 INFO [HbmBinder] Mapping class: ome.model.display.ChannelBinding -> channelbinding 12:00:38,081 INFO [Configuration] Reading mappings from resource : ome/model/results/CellExtent.hbm.xml 12:00:38,088 INFO [HbmBinder] Mapping class: ome.model.results.CellExtent -> cellextent 12:00:38,092 INFO [Configuration] Reading mappings from resource : ome/model/results/NucleusMinorAxisLength.hbm.xml 12:00:38,112 INFO [HbmBinder] Mapping class: ome.model.results.NucleusMinorAxisLength -> nucleusminoraxislength 12:00:38,114 INFO [Configuration] Reading mappings from resource : ome/model/enums/RenderingModel.hbm.xml 12:00:38,122 INFO [HbmBinder] Mapping class: ome.model.enums.RenderingModel -> renderingmodel 12:00:38,123 INFO [Configuration] Reading mappings from resource : ome/model/meta/ExperimenterGroup.hbm.xml 12:00:38,131 INFO [HbmBinder] Mapping class: ome.model.meta.ExperimenterGroup -> experimentergroup 12:00:38,137 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYZCTtoXYCTLink.hbm.xml 12:00:38,148 INFO [HbmBinder] Mapping class: ome.model.uroi.XYZCTtoXYCTLink -> xyzcttoxyctlink 12:00:38,149 INFO [Configuration] Reading mappings from resource : ome/model/meta/GroupExperimenterMap.hbm.xml 12:00:38,157 INFO [HbmBinder] Mapping class: ome.model.meta.GroupExperimenterMap -> groupexperimentermap 12:00:38,159 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/FilterSet.hbm.xml 12:00:38,175 INFO [HbmBinder] Mapping class: ome.model.acquisition.FilterSet -> filterset 12:00:38,177 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYCTtoXYTLink.hbm.xml 12:00:38,194 INFO [HbmBinder] Mapping class: ome.model.uroi.XYCTtoXYTLink -> xycttoxytlink 12:00:38,195 INFO [Configuration] Reading mappings from resource : ome/model/results/ImageNucleasCount.hbm.xml 12:00:38,205 INFO [HbmBinder] Mapping class: ome.model.results.ImageNucleasCount -> imagenucleascount 12:00:38,207 INFO [Configuration] Reading mappings from resource : ome/model/meta/Event.hbm.xml 12:00:38,214 INFO [HbmBinder] Mapping class: ome.model.meta.Event -> event 12:00:38,216 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/EmissionFilter.hbm.xml 12:00:38,225 INFO [HbmBinder] Mapping class: ome.model.acquisition.EmissionFilter -> emissionfilter 12:00:38,228 INFO [Configuration] Reading mappings from resource : ome/model/enums/AcquisitionMode.hbm.xml 12:00:38,234 INFO [HbmBinder] Mapping class: ome.model.enums.AcquisitionMode -> acquisitionmode 12:00:38,236 INFO [Configuration] Reading mappings from resource : ome/model/core/OriginalFile.hbm.xml 12:00:38,243 INFO [HbmBinder] Mapping class: ome.model.core.OriginalFile -> originalfile 12:00:38,246 INFO [Configuration] Reading mappings from resource : ome/model/annotations/ImageAnnotation.hbm.xml 12:00:38,253 INFO [HbmBinder] Mapping class: ome.model.annotations.ImageAnnotation -> imageannotation 12:00:38,255 INFO [Configuration] Reading mappings from resource : ome/model/containers/CategoryGroupCategoryLink.hbm.xml 12:00:38,262 INFO [HbmBinder] Mapping class: ome.model.containers.CategoryGroupCategoryLink -> categorygroupcategorylink 12:00:38,267 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYCtoXYLink.hbm.xml 12:00:38,279 INFO [HbmBinder] Mapping class: ome.model.uroi.XYCtoXYLink -> xyctoxylink 12:00:38,280 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYTtoXYLink.hbm.xml 12:00:38,288 INFO [HbmBinder] Mapping class: ome.model.uroi.XYTtoXYLink -> xyttoxylink 12:00:38,290 INFO [Configuration] Reading mappings from resource : ome/model/display/Thumbnail.hbm.xml 12:00:38,297 INFO [HbmBinder] Mapping class: ome.model.display.Thumbnail -> thumbnail 12:00:38,299 INFO [Configuration] Reading mappings from resource : ome/model/display/RenderingDef.hbm.xml 12:00:38,316 INFO [HbmBinder] Mapping class: ome.model.display.RenderingDef -> renderingdef 12:00:38,319 INFO [Configuration] Reading mappings from resource : ome/model/enums/Binning.hbm.xml 12:00:38,327 INFO [HbmBinder] Mapping class: ome.model.enums.Binning -> binning 12:00:38,329 INFO [Configuration] Reading mappings from resource : ome/model/display/Color.hbm.xml 12:00:38,336 INFO [HbmBinder] Mapping class: ome.model.display.Color -> color 12:00:38,338 INFO [Configuration] Reading mappings from resource : ome/model/enums/Family.hbm.xml 12:00:38,345 INFO [HbmBinder] Mapping class: ome.model.enums.Family -> family 12:00:38,346 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYZTtoXYTLink.hbm.xml 12:00:38,354 INFO [HbmBinder] Mapping class: ome.model.uroi.XYZTtoXYTLink -> xyzttoxytlink 12:00:38,356 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/LightSource.hbm.xml 12:00:38,363 INFO [HbmBinder] Mapping class: ome.model.acquisition.LightSource -> lightsource 12:00:38,365 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/Filament.hbm.xml 12:00:38,371 INFO [HbmBinder] Mapping joined-subclass: ome.model.acquisition.Filament -> filament 12:00:38,372 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/Laser.hbm.xml 12:00:38,378 INFO [HbmBinder] Mapping joined-subclass: ome.model.acquisition.Laser -> laser 12:00:38,379 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/Arc.hbm.xml 12:00:38,385 INFO [HbmBinder] Mapping joined-subclass: ome.model.acquisition.Arc -> arc 12:00:38,385 INFO [Configuration] Reading mappings from resource : ome/model/enums/Medium.hbm.xml 12:00:38,392 INFO [HbmBinder] Mapping class: ome.model.enums.Medium -> medium 12:00:38,394 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYZTtoXYZLink.hbm.xml 12:00:38,402 INFO [HbmBinder] Mapping class: ome.model.uroi.XYZTtoXYZLink -> xyzttoxyzlink 12:00:38,404 INFO [Configuration] Reading mappings from resource : ome/model/containers/Project.hbm.xml 12:00:38,416 INFO [HbmBinder] Mapping class: ome.model.containers.Project -> project 12:00:38,419 INFO [Configuration] Reading mappings from resource : ome/model/results/NucleusPerimeter.hbm.xml 12:00:38,425 INFO [HbmBinder] Mapping class: ome.model.results.NucleusPerimeter -> nucleusperimeter 12:00:38,427 INFO [Configuration] Reading mappings from resource : ome/model/containers/ProjectDatasetLink.hbm.xml 12:00:38,434 INFO [HbmBinder] Mapping class: ome.model.containers.ProjectDatasetLink -> projectdatasetlink 12:00:38,435 INFO [Configuration] Reading mappings from resource : ome/model/results/CellPosition.hbm.xml 12:00:38,442 INFO [HbmBinder] Mapping class: ome.model.results.CellPosition -> cellposition 12:00:38,445 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/DetectorSettings.hbm.xml 12:00:38,459 INFO [HbmBinder] Mapping class: ome.model.acquisition.DetectorSettings -> detectorsettings 12:00:38,462 INFO [Configuration] Reading mappings from resource : ome/model/containers/DatasetImageLink.hbm.xml 12:00:38,469 INFO [HbmBinder] Mapping class: ome.model.containers.DatasetImageLink -> datasetimagelink 12:00:38,471 INFO [Configuration] Reading mappings from resource : ome/model/results/CellEccentricity.hbm.xml 12:00:38,484 INFO [HbmBinder] Mapping class: ome.model.results.CellEccentricity -> celleccentricity 12:00:38,486 INFO [Configuration] Reading mappings from resource : ome/model/enums/PixelsType.hbm.xml 12:00:38,494 INFO [HbmBinder] Mapping class: ome.model.enums.PixelsType -> pixelstype 12:00:38,495 INFO [Configuration] Reading mappings from resource : ome/model/enums/Format.hbm.xml 12:00:38,502 INFO [HbmBinder] Mapping class: ome.model.enums.Format -> format 12:00:38,504 INFO [Configuration] Reading mappings from resource : ome/model/roi/RoiSet.hbm.xml 12:00:38,515 INFO [HbmBinder] Mapping class: ome.model.roi.RoiSet -> roiset 12:00:38,517 INFO [Configuration] Reading mappings from resource : ome/model/core/LogicalChannel.hbm.xml 12:00:38,525 INFO [HbmBinder] Mapping class: ome.model.core.LogicalChannel -> logicalchannel 12:00:38,528 INFO [Configuration] Reading mappings from resource : ome/model/enums/LaserType.hbm.xml 12:00:38,536 INFO [HbmBinder] Mapping class: ome.model.enums.LaserType -> lasertype 12:00:38,537 INFO [Configuration] Reading mappings from resource : ome/model/enums/Pulse.hbm.xml 12:00:38,544 INFO [HbmBinder] Mapping class: ome.model.enums.Pulse -> pulse 12:00:38,549 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYZCTtoXYZTLink.hbm.xml 12:00:38,561 INFO [HbmBinder] Mapping class: ome.model.uroi.XYZCTtoXYZTLink -> xyzcttoxyztlink 12:00:39,294 INFO [Configuration] Reading mappings from resource : ome/model/containers/CategoryGroup.hbm.xml 12:00:39,303 INFO [HbmBinder] Mapping class: ome.model.containers.CategoryGroup -> categorygroup 12:00:39,306 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/TransmittanceRange.hbm.xml 12:00:39,312 INFO [HbmBinder] Mapping class: ome.model.acquisition.TransmittanceRange -> transmittancerange 12:00:39,314 INFO [Configuration] Reading mappings from resource : ome/model/results/CellMinorAxisLength.hbm.xml 12:00:39,321 INFO [HbmBinder] Mapping class: ome.model.results.CellMinorAxisLength -> cellminoraxislength 12:00:39,322 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/Microscope.hbm.xml 12:00:39,329 INFO [HbmBinder] Mapping class: ome.model.acquisition.Microscope -> microscope 12:00:39,332 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/ExcitationFilter.hbm.xml 12:00:39,340 INFO [HbmBinder] Mapping class: ome.model.acquisition.ExcitationFilter -> excitationfilter 12:00:39,341 INFO [Configuration] Reading mappings from resource : ome/model/jobs/Job.hbm.xml 12:00:39,348 INFO [HbmBinder] Mapping class: ome.model.jobs.Job -> job 12:00:39,351 INFO [Configuration] Reading mappings from resource : ome/model/jobs/ScriptJob.hbm.xml 12:00:39,357 INFO [HbmBinder] Mapping joined-subclass: ome.model.jobs.ScriptJob -> scriptjob 12:00:39,358 INFO [Configuration] Reading mappings from resource : ome/model/jobs/ImportJob.hbm.xml 12:00:39,364 INFO [HbmBinder] Mapping joined-subclass: ome.model.jobs.ImportJob -> importjob 12:00:39,365 INFO [Configuration] Reading mappings from resource : ome/model/core/PixelsDimensions.hbm.xml 12:00:39,372 INFO [HbmBinder] Mapping class: ome.model.core.PixelsDimensions -> pixelsdimensions 12:00:39,384 INFO [Configuration] Reading mappings from resource : ome/model/display/CodomainMapContext.hbm.xml 12:00:39,391 INFO [HbmBinder] Mapping class: ome.model.display.CodomainMapContext -> codomainmapcontext 12:00:39,393 INFO [Configuration] Reading mappings from resource : ome/model/display/ContrastStretchingContext.hbm.xml 12:00:39,399 INFO [HbmBinder] Mapping joined-subclass: ome.model.display.ContrastStretchingContext -> contraststretchingcontext 12:00:39,399 INFO [Configuration] Reading mappings from resource : ome/model/display/PlaneSlicingContext.hbm.xml 12:00:39,405 INFO [HbmBinder] Mapping joined-subclass: ome.model.display.PlaneSlicingContext -> planeslicingcontext 12:00:39,406 INFO [Configuration] Reading mappings from resource : ome/model/display/ReverseIntensityContext.hbm.xml 12:00:39,411 INFO [HbmBinder] Mapping joined-subclass: ome.model.display.ReverseIntensityContext -> reverseintensitycontext 12:00:39,412 INFO [Configuration] Reading mappings from resource : ome/model/jobs/JobStatus.hbm.xml 12:00:39,418 INFO [HbmBinder] Mapping class: ome.model.jobs.JobStatus -> jobstatus 12:00:39,420 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYCTtoXYCLink.hbm.xml 12:00:39,427 INFO [HbmBinder] Mapping class: ome.model.uroi.XYCTtoXYCLink -> xycttoxyclink 12:00:39,429 INFO [Configuration] Reading mappings from resource : ome/model/enums/Coating.hbm.xml 12:00:39,435 INFO [HbmBinder] Mapping class: ome.model.enums.Coating -> coating 12:00:39,437 INFO [Configuration] Reading mappings from resource : ome/model/enums/DetectorType.hbm.xml 12:00:39,443 INFO [HbmBinder] Mapping class: ome.model.enums.DetectorType -> detectortype 12:00:39,445 INFO [Configuration] Reading mappings from resource : ome/model/enums/Illumination.hbm.xml 12:00:39,451 INFO [HbmBinder] Mapping class: ome.model.enums.Illumination -> illumination 12:00:39,452 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYZCtoXYZLink.hbm.xml 12:00:39,459 INFO [HbmBinder] Mapping class: ome.model.uroi.XYZCtoXYZLink -> xyzctoxyzlink 12:00:39,467 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYZCTtoXYZCLink.hbm.xml 12:00:39,474 INFO [HbmBinder] Mapping class: ome.model.uroi.XYZCTtoXYZCLink -> xyzcttoxyzclink 12:00:39,476 INFO [Configuration] Reading mappings from resource : ome/model/display/QuantumDef.hbm.xml 12:00:39,482 INFO [HbmBinder] Mapping class: ome.model.display.QuantumDef -> quantumdef 12:00:39,484 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/Detector.hbm.xml 12:00:39,491 INFO [HbmBinder] Mapping class: ome.model.acquisition.Detector -> detector 12:00:39,493 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/OTF.hbm.xml 12:00:39,500 INFO [HbmBinder] Mapping class: ome.model.acquisition.OTF -> otf 12:00:39,502 INFO [Configuration] Reading mappings from resource : ome/model/enums/AberrationCorrection.hbm.xml 12:00:39,513 INFO [HbmBinder] Mapping class: ome.model.enums.AberrationCorrection -> aberrationcorrection 12:00:39,515 INFO [Configuration] Reading mappings from resource : ome/model/core/PixelsOriginalFileMap.hbm.xml 12:00:39,522 INFO [HbmBinder] Mapping class: ome.model.core.PixelsOriginalFileMap -> pixelsoriginalfilemap 12:00:39,523 INFO [Configuration] Reading mappings from resource : ome/model/results/NucleusMajorAxisLength.hbm.xml 12:00:39,531 INFO [HbmBinder] Mapping class: ome.model.results.NucleusMajorAxisLength -> nucleusmajoraxislength 12:00:39,532 INFO [Configuration] Reading mappings from resource : ome/model/results/NucleusExtent.hbm.xml 12:00:39,545 INFO [HbmBinder] Mapping class: ome.model.results.NucleusExtent -> nucleusextent 12:00:39,546 INFO [Configuration] Reading mappings from resource : ome/model/enums/PhotometricInterpretation.hbm.xml 12:00:39,554 INFO [HbmBinder] Mapping class: ome.model.enums.PhotometricInterpretation -> photometricinterpretation 12:00:39,559 INFO [Configuration] Reading mappings from resource : ome/model/enums/RegionType.hbm.xml 12:00:39,565 INFO [HbmBinder] Mapping class: ome.model.enums.RegionType -> regiontype 12:00:39,567 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/Filter.hbm.xml 12:00:39,574 INFO [HbmBinder] Mapping class: ome.model.acquisition.Filter -> filter 12:00:39,576 INFO [Configuration] Reading mappings from resource : ome/model/enums/EventType.hbm.xml 12:00:39,582 INFO [HbmBinder] Mapping class: ome.model.enums.EventType -> eventtype 12:00:39,584 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/CustomizedFilterSet.hbm.xml 12:00:39,591 INFO [HbmBinder] Mapping class: ome.model.acquisition.CustomizedFilterSet -> customizedfilterset 12:00:39,593 INFO [Configuration] Reading mappings from resource : ome/model/uroi/UShape.hbm.xml 12:00:39,607 INFO [HbmBinder] Mapping class: ome.model.uroi.UShape -> ushape 12:00:39,609 INFO [Configuration] Reading mappings from resource : ome/model/uroi/USquare.hbm.xml 12:00:39,615 INFO [HbmBinder] Mapping joined-subclass: ome.model.uroi.USquare -> usquare 12:00:39,616 INFO [Configuration] Reading mappings from resource : ome/model/containers/Category.hbm.xml 12:00:39,623 INFO [HbmBinder] Mapping class: ome.model.containers.Category -> category 12:00:39,625 INFO [Configuration] Reading mappings from resource : ome/model/enums/LaserMedium.hbm.xml 12:00:39,632 INFO [HbmBinder] Mapping class: ome.model.enums.LaserMedium -> lasermedium 12:00:39,633 INFO [Configuration] Reading mappings from resource : ome/model/enums/MicroscopeType.hbm.xml 12:00:39,641 INFO [HbmBinder] Mapping class: ome.model.enums.MicroscopeType -> microscopetype 12:00:39,642 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/LightSettings.hbm.xml 12:00:39,649 INFO [HbmBinder] Mapping class: ome.model.acquisition.LightSettings -> lightsettings 12:00:39,650 INFO [Configuration] Reading mappings from resource : ome/model/enums/IrisDiaphragm.hbm.xml 12:00:39,657 INFO [HbmBinder] Mapping class: ome.model.enums.IrisDiaphragm -> irisdiaphragm 12:00:39,658 INFO [Configuration] Reading mappings from resource : ome/model/enums/DimensionOrder.hbm.xml 12:00:39,666 INFO [HbmBinder] Mapping class: ome.model.enums.DimensionOrder -> dimensionorder 12:00:39,667 INFO [Configuration] Reading mappings from resource : ome/model/enums/FrequencyMultiplication.hbm.xml 12:00:39,674 INFO [HbmBinder] Mapping class: ome.model.enums.FrequencyMultiplication -> frequencymultiplication 12:00:39,675 INFO [Configuration] Reading mappings from resource : ome/model/meta/Experimenter.hbm.xml 12:00:39,682 INFO [HbmBinder] Mapping class: ome.model.meta.Experimenter -> experimenter 12:00:39,688 INFO [Configuration] Reading mappings from resource : ome/model/annotations/DatasetAnnotation.hbm.xml 12:00:39,695 INFO [HbmBinder] Mapping class: ome.model.annotations.DatasetAnnotation -> datasetannotation 12:00:39,696 INFO [Configuration] Reading mappings from resource : ome/model/results/CellPerimeter.hbm.xml 12:00:39,710 INFO [HbmBinder] Mapping class: ome.model.results.CellPerimeter -> cellperimeter 12:00:39,712 INFO [Configuration] Reading mappings from resource : ome/model/results/CellMajorAxisLength.hbm.xml 12:00:39,718 INFO [HbmBinder] Mapping class: ome.model.results.CellMajorAxisLength -> cellmajoraxislength 12:00:39,719 INFO [Configuration] Reading mappings from resource : ome/model/jobs/JobOriginalFileLink.hbm.xml 12:00:39,727 INFO [HbmBinder] Mapping class: ome.model.jobs.JobOriginalFileLink -> joboriginalfilelink 12:00:39,728 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYZCtoXYCLink.hbm.xml 12:00:39,735 INFO [HbmBinder] Mapping class: ome.model.uroi.XYZCtoXYCLink -> xyzctoxyclink 12:00:39,737 INFO [Configuration] Reading mappings from resource : ome/model/uroi/BoundingBox.hbm.xml 12:00:39,744 INFO [HbmBinder] Mapping class: ome.model.uroi.BoundingBox -> boundingbox 12:00:39,746 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XY.hbm.xml 12:00:39,752 INFO [HbmBinder] Mapping joined-subclass: ome.model.uroi.XY -> xy 12:00:39,753 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYC.hbm.xml 12:00:39,759 INFO [HbmBinder] Mapping joined-subclass: ome.model.uroi.XYC -> xyc 12:00:39,760 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYCT.hbm.xml 12:00:39,767 INFO [HbmBinder] Mapping joined-subclass: ome.model.uroi.XYCT -> xyct 12:00:39,769 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYT.hbm.xml 12:00:39,778 INFO [HbmBinder] Mapping joined-subclass: ome.model.uroi.XYT -> xyt 12:00:39,779 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYZ.hbm.xml 12:00:39,786 INFO [HbmBinder] Mapping joined-subclass: ome.model.uroi.XYZ -> xyz 12:00:39,787 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYZC.hbm.xml 12:00:39,795 INFO [HbmBinder] Mapping joined-subclass: ome.model.uroi.XYZC -> xyzc 12:00:39,797 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYZCT.hbm.xml 12:00:39,803 INFO [HbmBinder] Mapping joined-subclass: ome.model.uroi.XYZCT -> xyzct 12:00:39,804 INFO [Configuration] Reading mappings from resource : ome/model/uroi/XYZT.hbm.xml 12:00:39,812 INFO [HbmBinder] Mapping joined-subclass: ome.model.uroi.XYZT -> xyzt 12:00:39,813 INFO [Configuration] Reading mappings from resource : ome/model/core/Image.hbm.xml 12:00:39,824 INFO [HbmBinder] Mapping class: ome.model.core.Image -> image 12:00:39,830 INFO [Configuration] Reading mappings from resource : ome/model/roi/ShapeArea.hbm.xml 12:00:39,836 INFO [HbmBinder] Mapping class: ome.model.roi.ShapeArea -> shapearea 12:00:39,842 INFO [Configuration] Reading mappings from resource : ome/model/roi/Square.hbm.xml 12:00:39,848 INFO [HbmBinder] Mapping joined-subclass: ome.model.roi.Square -> square 12:00:39,848 INFO [Configuration] Reading mappings from resource : ome/model/core/Channel.hbm.xml 12:00:39,855 INFO [HbmBinder] Mapping class: ome.model.core.Channel -> channel 12:00:39,858 INFO [Configuration] Reading mappings from resource : ome/model/enums/ExperimentType.hbm.xml 12:00:39,872 INFO [HbmBinder] Mapping class: ome.model.enums.ExperimentType -> experimenttype 12:00:39,876 INFO [Configuration] Reading mappings from resource : ome/model/uroi/USlice.hbm.xml 12:00:39,883 INFO [HbmBinder] Mapping class: ome.model.uroi.USlice -> uslice 12:00:39,885 INFO [Configuration] Reading mappings from resource : ome/model/results/NucleusArea.hbm.xml 12:00:39,892 INFO [HbmBinder] Mapping class: ome.model.results.NucleusArea -> nucleusarea 12:00:39,893 INFO [Configuration] Reading mappings from resource : ome/model/meta/ExternalInfo.hbm.xml 12:00:39,900 INFO [HbmBinder] Mapping class: ome.model.meta.ExternalInfo -> externalinfo 12:00:39,903 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/Instrument.hbm.xml 12:00:39,910 INFO [HbmBinder] Mapping class: ome.model.acquisition.Instrument -> instrument 12:00:39,914 INFO [Configuration] Reading mappings from resource : ome/model/core/PlaneInfo.hbm.xml 12:00:39,921 INFO [HbmBinder] Mapping class: ome.model.core.PlaneInfo -> planeinfo 12:00:39,925 INFO [Configuration] Reading mappings from resource : ome/model/meta/EventLog.hbm.xml 12:00:39,931 INFO [HbmBinder] Mapping class: ome.model.meta.EventLog -> eventlog 12:00:39,932 INFO [Configuration] Reading mappings from resource : ome/model/uroi/Specification.hbm.xml 12:00:39,938 INFO [HbmBinder] Mapping class: ome.model.uroi.Specification -> specification 12:00:39,940 INFO [Configuration] Reading mappings from resource : ome/model/uroi/URoi.hbm.xml 12:00:39,946 INFO [HbmBinder] Mapping joined-subclass: ome.model.uroi.URoi -> uroi 12:00:39,947 INFO [Configuration] Reading mappings from resource : ome/model/uroi/Overlay.hbm.xml 12:00:39,953 INFO [HbmBinder] Mapping joined-subclass: ome.model.uroi.Overlay -> overlay 12:00:39,954 INFO [Configuration] Reading mappings from resource : ome/model/acquisition/Objective.hbm.xml 12:00:39,961 INFO [HbmBinder] Mapping class: ome.model.acquisition.Objective -> objective 12:00:39,968 INFO [Configuration] Reading mappings from resource : ome/model/uroi/Region.hbm.xml 12:00:39,975 INFO [HbmBinder] Mapping class: ome.model.uroi.Region -> region 12:00:39,979 INFO [Configuration] Reading mappings from resource : ome/model/results/NucleusSolidity.hbm.xml 12:00:39,985 INFO [HbmBinder] Mapping class: ome.model.results.NucleusSolidity -> nucleussolidity 12:00:39,987 INFO [Configuration] Reading mappings from resource : ome/model/roi/RoiExtent.hbm.xml 12:00:40,003 INFO [HbmBinder] Mapping class: ome.model.roi.RoiExtent -> roiextent 12:00:40,005 INFO [Configuration] Reading mappings from resource : ome/model/enums/ContrastMethod.hbm.xml 12:00:40,012 INFO [HbmBinder] Mapping class: ome.model.enums.ContrastMethod -> contrastmethod 12:00:40,013 INFO [Configuration] Reading mappings from resource : ome/model/enums/FilamentType.hbm.xml 12:00:40,019 INFO [HbmBinder] Mapping class: ome.model.enums.FilamentType -> filamenttype 12:00:40,021 INFO [Configuration] Reading mappings from resource : ome/model/meta/DBPatch.hbm.xml 12:00:40,027 INFO [HbmBinder] Mapping class: ome.model.meta.DBPatch -> dbpatch 12:00:40,028 INFO [Configuration] Reading mappings from resource : ome/model/results/ImageCellCount.hbm.xml 12:00:40,045 INFO [HbmBinder] Mapping class: ome.model.results.ImageCellCount -> imagecellcount 12:00:40,047 INFO [Configuration] Reading mappings from resource : ome/model/containers/Dataset.hbm.xml 12:00:40,054 INFO [HbmBinder] Mapping class: ome.model.containers.Dataset -> dataset 12:00:40,058 INFO [Configuration] Reading mappings from resource : ome/model/enums/FilterType.hbm.xml 12:00:40,065 INFO [HbmBinder] Mapping class: ome.model.enums.FilterType -> filtertype 12:00:40,067 INFO [Configuration] Reading mappings from resource : ome/model/results/NucleusPosition.hbm.xml 12:00:40,074 INFO [HbmBinder] Mapping class: ome.model.results.NucleusPosition -> nucleusposition 12:00:40,077 INFO [Configuration] Reading mappings from resource : ome/model/annotations/ProjectAnnotation.hbm.xml 12:00:40,084 INFO [HbmBinder] Mapping class: ome.model.annotations.ProjectAnnotation -> projectannotation 12:00:40,086 INFO [Configuration] Configured SessionFactory: null 12:00:40,092 INFO [LocalSessionFactoryBean] Building new Hibernate SessionFactory 12:00:40,097 INFO [HbmBinder] Mapping collection: ome.model.roi.Roi5D.roiMaps -> roimap 12:00:40,098 INFO [HbmBinder] Mapping collection: ome.model.roi.Roi5D.extents -> roiextent 12:00:40,098 INFO [HbmBinder] Mapping collection: ome.model.core.Pixels.planeInfo -> planeinfo 12:00:40,099 INFO [HbmBinder] Mapping collection: ome.model.core.Pixels.pixelsFileMaps -> pixelsoriginalfilemap 12:00:40,099 INFO [HbmBinder] Mapping collection: ome.model.core.Pixels.channels -> channel 12:00:40,101 INFO [HbmBinder] Mapping collection: ome.model.core.Pixels.settings -> renderingdef 12:00:40,101 INFO [HbmBinder] Mapping collection: ome.model.core.Pixels.thumbnails -> thumbnail 12:00:40,101 INFO [HbmBinder] Mapping collection: ome.model.meta.ExperimenterGroup.groupExperimenterMap -> groupexperimentermap 12:00:40,101 INFO [HbmBinder] Mapping collection: ome.model.meta.Event.logs -> eventlog 12:00:40,101 INFO [HbmBinder] Mapping collection: ome.model.core.OriginalFile.pixelsFileMaps -> pixelsoriginalfilemap 12:00:40,101 INFO [HbmBinder] Mapping collection: ome.model.display.RenderingDef.waveRendering -> channelbinding 12:00:40,101 INFO [HbmBinder] Mapping collection: ome.model.display.RenderingDef.spatialDomainEnhancement -> codomainmapcontext 12:00:40,102 INFO [HbmBinder] Mapping collection: ome.model.containers.Project.datasetLinks -> projectdatasetlink 12:00:40,102 INFO [HbmBinder] Mapping collection: ome.model.containers.Project.annotations -> projectannotation 12:00:40,102 INFO [HbmBinder] Mapping collection: ome.model.roi.RoiSet.roiMaps -> roimap 12:00:40,102 INFO [HbmBinder] Mapping collection: ome.model.containers.CategoryGroup.categoryLinks -> categorygroupcategorylink 12:00:40,102 INFO [HbmBinder] Mapping collection: ome.model.jobs.ScriptJob.originalFileLinks -> joboriginalfilelink 12:00:40,102 INFO [HbmBinder] Mapping collection: ome.model.jobs.ImportJob.originalFileLinks -> joboriginalfilelink 12:00:40,102 INFO [HbmBinder] Mapping collection: ome.model.containers.Category.categoryGroupLinks -> categorygroupcategorylink 12:00:40,103 INFO [HbmBinder] Mapping collection: ome.model.containers.Category.imageLinks -> categoryimagelink 12:00:40,103 INFO [HbmBinder] Mapping collection: ome.model.meta.Experimenter.groupExperimenterMap -> groupexperimentermap 12:00:40,103 INFO [HbmBinder] Mapping collection: ome.model.uroi.XY.xyzLinks -> xyztoxylink 12:00:40,103 INFO [HbmBinder] Mapping collection: ome.model.uroi.XY.xycLinks -> xyctoxylink 12:00:40,103 INFO [HbmBinder] Mapping collection: ome.model.uroi.XY.xytLinks -> xyttoxylink 12:00:40,103 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYC.xyzcLinks -> xyzctoxyclink 12:00:40,103 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYC.xyctLinks -> xycttoxyclink 12:00:40,103 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYC.xyLinks -> xyctoxylink 12:00:40,104 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYCT.xyzctLinks -> xyzcttoxyctlink 12:00:40,104 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYCT.xycLinks -> xycttoxyclink 12:00:40,104 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYCT.xytLinks -> xycttoxytlink 12:00:40,104 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYT.xyztLinks -> xyzttoxytlink 12:00:40,106 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYT.xyctLinks -> xycttoxytlink 12:00:40,106 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYT.xyLinks -> xyttoxylink 12:00:40,106 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYZ.xyzcLinks -> xyzctoxyzlink 12:00:40,106 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYZ.xyztLinks -> xyzttoxyzlink 12:00:40,107 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYZ.xyLinks -> xyztoxylink 12:00:40,107 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYZC.xyzctLinks -> xyzcttoxyzclink 12:00:40,107 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYZC.xyzLinks -> xyzctoxyzlink 12:00:40,107 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYZC.xycLinks -> xyzctoxyclink 12:00:40,107 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYZCT.xyzcLinks -> xyzcttoxyzclink 12:00:40,107 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYZCT.xyztLinks -> xyzcttoxyztlink 12:00:40,107 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYZCT.xyctLinks -> xyzcttoxyctlink 12:00:40,108 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYZT.xyzctLinks -> xyzcttoxyztlink 12:00:40,108 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYZT.xyzLinks -> xyzttoxyzlink 12:00:40,109 INFO [HbmBinder] Mapping collection: ome.model.uroi.XYZT.xytLinks -> xyzttoxytlink 12:00:40,109 INFO [HbmBinder] Mapping collection: ome.model.core.Image.pixels -> pixels 12:00:40,109 INFO [HbmBinder] Mapping collection: ome.model.core.Image.categoryLinks -> categoryimagelink 12:00:40,109 INFO [HbmBinder] Mapping collection: ome.model.core.Image.datasetLinks -> datasetimagelink 12:00:40,109 INFO [HbmBinder] Mapping collection: ome.model.core.Image.annotations -> imageannotation 12:00:40,109 INFO [HbmBinder] Mapping collection: ome.model.uroi.USlice.shapes -> ushape 12:00:40,109 INFO [HbmBinder] Mapping collection: ome.model.acquisition.Instrument.detector -> detector 12:00:40,110 INFO [HbmBinder] Mapping collection: ome.model.acquisition.Instrument.objective -> objective 12:00:40,110 INFO [HbmBinder] Mapping collection: ome.model.acquisition.Instrument.lightSource -> lightsource 12:00:40,110 INFO [HbmBinder] Mapping collection: ome.model.acquisition.Instrument.filter -> filter 12:00:40,110 INFO [HbmBinder] Mapping collection: ome.model.uroi.URoi.slices -> uslice 12:00:40,110 INFO [HbmBinder] Mapping collection: ome.model.uroi.Region.boxes -> boundingbox 12:00:40,110 INFO [HbmBinder] Mapping collection: ome.model.uroi.Region.metadata -> metadata 12:00:40,110 INFO [HbmBinder] Mapping collection: ome.model.uroi.Region.specs -> specification 12:00:40,110 INFO [HbmBinder] Mapping collection: ome.model.roi.RoiExtent.shapes -> shapearea 12:00:40,111 INFO [HbmBinder] Mapping collection: ome.model.containers.Dataset.projectLinks -> projectdatasetlink 12:00:40,111 INFO [HbmBinder] Mapping collection: ome.model.containers.Dataset.imageLinks -> datasetimagelink 12:00:40,111 INFO [HbmBinder] Mapping collection: ome.model.containers.Dataset.annotations -> datasetannotation 12:00:40,277 INFO [ConnectionProviderFactory] Initializing connection provider: org.springframework.orm.hibernate3.LocalDataSourceConnectionProvider 12:00:40,771 INFO [SettingsFactory] RDBMS: PostgreSQL, version: 8.3.0 12:00:40,771 INFO [SettingsFactory] JDBC driver: PostgreSQL Native Driver, version: PostgreSQL 8.2 JDBC3 with SSL (build 506) 12:00:40,800 INFO [Dialect] Using dialect: org.hibernate.dialect.PostgreSQLDialect 12:00:40,828 INFO [TransactionFactoryFactory] Using default transaction strategy (direct JDBC transactions) 12:00:40,831 INFO [TransactionManagerLookupFactory] No TransactionManagerLookup configured (in JTA environment, use of read-write or transactional second-level cache is not recommended) 12:00:40,831 INFO [SettingsFactory] Automatic flush during beforeCompletion(): disabled 12:00:40,831 INFO [SettingsFactory] Automatic session close at end of transaction: disabled 12:00:40,833 INFO [SettingsFactory] Scrollable result sets: enabled 12:00:40,833 INFO [SettingsFactory] JDBC3 getGeneratedKeys(): disabled 12:00:40,833 INFO [SettingsFactory] Connection release mode: on_close 12:00:40,833 INFO [SettingsFactory] Default batch fetch size: 1 12:00:40,833 INFO [SettingsFactory] Generate SQL with comments: disabled 12:00:40,834 INFO [SettingsFactory] Order SQL updates by primary key: disabled 12:00:40,834 INFO [SettingsFactory] Order SQL inserts for batching: disabled 12:00:40,834 INFO [SettingsFactory] Query translator: org.hibernate.hql.ast.ASTQueryTranslatorFactory 12:00:40,838 INFO [ASTQueryTranslatorFactory] Using ASTQueryTranslatorFactory 12:00:40,838 INFO [SettingsFactory] Query language substitutions: {} 12:00:40,838 INFO [SettingsFactory] JPA-QL strict compliance: disabled 12:00:40,838 INFO [SettingsFactory] Second-level cache: enabled 12:00:40,839 INFO [SettingsFactory] Query cache: disabled 12:00:40,839 INFO [SettingsFactory] Cache provider: org.hibernate.cache.NoCacheProvider 12:00:40,839 INFO [SettingsFactory] Optimize cache for minimal puts: disabled 12:00:40,839 INFO [SettingsFactory] Structured second-level cache entries: disabled 12:00:40,847 INFO [SettingsFactory] Statistics: disabled 12:00:40,847 INFO [SettingsFactory] Deleted entity synthetic identifier rollback: disabled 12:00:40,847 INFO [SettingsFactory] Default entity-mode: pojo 12:00:40,848 INFO [SettingsFactory] Named query checking : enabled 12:00:40,908 INFO [SessionFactoryImpl] building session factory 12:00:40,970 WARN [JBossManagedConnectionPool] Unable to fill pool org.jboss.resource.JBossResourceException: Could not create connection; - nested throwable: (org.postgresql.util.PSQLException: FATAL: connection limit exceeded for non-superusers) at org.jboss.resource.adapter.jdbc.local.LocalManagedConnectionFactory.createManagedConnection(LocalManagedConnectionFactory.java:179) at org.jboss.resource.connectionmanager.InternalManagedConnectionPool.createConnectionEventListener(InternalManagedConnectionPool.java:577) at org.jboss.resource.connectionmanager.InternalManagedConnectionPool.fillToMin(InternalManagedConnectionPool.java:524) at org.jboss.resource.connectionmanager.PoolFiller.run(PoolFiller.java:74) at java.lang.Thread.run(Thread.java:613) Caused by: org.postgresql.util.PSQLException: FATAL: connection limit exceeded for non-superusers at org.postgresql.core.v3.ConnectionFactoryImpl.readStartupMessages(ConnectionFactoryImpl.java:443) at org.postgresql.core.v3.ConnectionFactoryImpl.openConnectionImpl(ConnectionFactoryImpl.java:98) at org.postgresql.core.ConnectionFactory.openConnection(ConnectionFactory.java:66) at org.postgresql.jdbc2.AbstractJdbc2Connection.(AbstractJdbc2Connection.java:125) at org.postgresql.jdbc3.AbstractJdbc3Connection.(AbstractJdbc3Connection.java:30) at org.postgresql.jdbc3.Jdbc3Connection.(Jdbc3Connection.java:24) at org.postgresql.Driver.makeConnection(Driver.java:382) at org.postgresql.Driver.connect(Driver.java:260) at org.jboss.resource.adapter.jdbc.local.LocalManagedConnectionFactory.createManagedConnection(LocalManagedConnectionFactory.java:171) ... 4 more 12:00:45,578 INFO [SessionFactoryObjectFactory] Not binding factory to JNDI, no JNDI name configured 12:00:45,703 INFO [DBPatchCheck] Verified database patch: OMERO3__5 12:00:45,707 INFO [ServerVersionCheck] ------------------------------------------------- 12:00:45,707 INFO [ServerVersionCheck] OMERO Version: 3.0-Beta2.3 (Rev: 1701) Ready. 12:00:45,707 INFO [ServerVersionCheck] ------------------------------------------------- 12:00:46,058 INFO [UpgradeCheck] no update needed 12:00:46,208 INFO [SimpleThreadPool] Job execution threads will use class loader of thread: main 12:00:46,227 INFO [QuartzScheduler] Quartz Scheduler v.1.5.2 created. 12:00:46,230 INFO [RAMJobStore] RAMJobStore initialized. 12:00:46,230 INFO [StdSchedulerFactory] Quartz scheduler 'DefaultQuartzScheduler' initialized from default resource file in Quartz package: 'quartz.properties' 12:00:46,230 INFO [StdSchedulerFactory] Quartz scheduler version: 1.5.2 12:00:46,231 INFO [QuartzScheduler] JobFactory set to: org.springframework.scheduling.quartz.AdaptableJobFactory@585faf 12:00:46,238 INFO [SchedulerFactoryBean] Starting Quartz Scheduler now 12:00:46,238 INFO [QuartzScheduler] Scheduler DefaultQuartzScheduler_$_NON_CLUSTERED started. 12:00:46,310 INFO [AbstractContextSource] Property 'userDn' not set - anonymous context will be used for read-write operations 12:00:46,454 INFO [JtaTransactionManager] Using JTA UserTransaction: org.jboss.tm.usertx.client.ServerVMClientUserTransaction@5f06f3 12:00:46,454 INFO [JtaTransactionManager] Using JTA TransactionManager: com.arjuna.ats.jbossatx.jta.TransactionManagerDelegate@c14888 12:00:47,114 INFO [QuartzScheduler] JobFactory set to: org.springframework.scheduling.quartz.AdaptableJobFactory@6d207c 12:00:47,114 INFO [SchedulerFactoryBean] Starting Quartz Scheduler now 12:00:47,114 INFO [QuartzScheduler] Scheduler DefaultQuartzScheduler_$_NON_CLUSTERED started. 12:00:47,137 INFO [EJB3Deployer] Deployed: file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/tmp/deploy/tmp61262omero.ear-contents/server.jar 12:00:47,144 INFO [EARDeployer] Started J2EE application: file:/Users/allisonmcarton/Desktop/omero-3.0-Beta2.3/jboss-4.2.1.GA/server/default/deploy/omero.ear 12:00:47,246 INFO [Http11Protocol] Starting Coyote HTTP/1.1 on http-0.0.0.0-8080 12:00:47,262 INFO [AjpProtocol] Starting Coyote AJP/1.3 on ajp-0.0.0.0-8009 12:00:47,270 INFO [Server] JBoss (MX MicroKernel) [4.2.1.GA (build: SVNTag=JBoss_4_2_1_GA date=200707131605)] Started in 39s:853ms