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<P><FONT SIZE=2>I was just trying to compile the importer; I followed Chris's suggestion:<BR>
> ant clean<BR>
> ANT_OPTS="-Xmx512M" ant quick build<BR>
which got me past the ivy dependencies but blew up at the importer.<BR>
<BR>
A normal install of the stable 3.0-M3 fails at anouther location (building romio.unit).<BR>
<BR>
Such fun.<BR>
<BR>
Thanks for any help.<BR>
<BR>
Mike<BR>
<BR>
Michael J. McCaughey, PhD<BR>
Molecular Physiology and Biophysics<BR>
U9203 MRBIII<BR>
6-6175<BR>
<BR>
<BR>
<BR>
-----Original Message-----<BR>
From: Brian Loranger [<A HREF="mailto:brian.loranger@lifesci.dundee.ac.uk">mailto:brian.loranger@lifesci.dundee.ac.uk</A>]<BR>
Sent: Tue 10/30/2007 8:03 AM<BR>
To: McCaughey, Michael J<BR>
Cc: Chris Allan; ome-users@lists.openmicroscopy.org.uk<BR>
Subject: Re: [ome-users] ivy dependancies<BR>
<BR>
Hi Michael,<BR>
<BR>
I'm the "importer" guy for OMERO.<BR>
<BR>
The OMERO.importer only uses a subset of the bio-formats library from <BR>
loci, so if you're trying to compile the entire loci package, you <BR>
will probably run into issues since they are constantly updating and <BR>
changing their library and we mirror their full repository.<BR>
<BR>
Instead, if you compile just the importer by itself, it should be <BR>
able to build with all of the required bio-formats parts pretty <BR>
reliably.<BR>
<BR>
I'm also curious, were you using ant to do the import build? (Our svn <BR>
maintainer is currently working on improving the ant build just now <BR>
to handle loci more effectively).<BR>
<BR>
Cheers,<BR>
<BR>
Brian Loranger<BR>
Software Developer, Open Microscopy Environment<BR>
Division of Gene Regulation and Expression<BR>
University of Dundee<BR>
<BR>
<BR>
<BR>
On 29 Oct 2007, at 19:26, McCaughey, Michael J wrote:<BR>
<BR>
> That's a help. Ignoring a few thousand warning messages, I get to <BR>
> this error in the importer compile:<BR>
><BR>
><BR>
> generate:<BR>
><BR>
> compile:<BR>
> [javac] Compiling 25 source files to /home/mrmike/Documents/<BR>
> omero/components/importer/target/classes<BR>
> [javac] ----------<BR>
> [javac] 1. ERROR in /home/mrmike/Documents/omero/components/<BR>
> importer/src/loci/formats/ome/OMEXMLMetadata.java (at line 134)<BR>
> [javac] OMEXMLNode node = new CustomNode(el);<BR>
> [javac] ^^^^^^^^^^<BR>
> [javac] CustomNode cannot be resolved to a type<BR>
><BR>
> any ideas on that one?<BR>
><BR>
> Michael J. McCaughey, PhD<BR>
> Molecular Physiology and Biophysics<BR>
> U9203 MRBIII<BR>
> 6-6175<BR>
><BR>
><BR>
><BR>
> -----Original Message-----<BR>
> From: Chris Allan [<A HREF="mailto:callan@blackcat.ca">mailto:callan@blackcat.ca</A>]<BR>
> Sent: Mon 10/29/2007 12:52 PM<BR>
> To: McCaughey, Michael J<BR>
> Cc: ome-users@lists.openmicroscopy.org.uk<BR>
> Subject: Re: [ome-users] ivy dependancies<BR>
><BR>
><BR>
> On 29 Oct 2007, at 17:15, McCaughey, Michael J wrote:<BR>
><BR>
> > I'm trying to install OMERO from a current trunk checkout, but I<BR>
> > can't build it due to some missing depends related to ivy. I've<BR>
> > poked around the SVN repository but couldn't find them. Any<BR>
> > suggestions? Error is attached below.<BR>
><BR>
> Hi Mike.<BR>
><BR>
> The build system is in a bit of flux at the moment (we're trying to<BR>
> remove some of the dependencies on the actual omero.class). Can you<BR>
> try the following?<BR>
><BR>
> ant clean<BR>
> ANT_OPTS="-Xmx512M" ant quick build<BR>
><BR>
> ><BR>
> > Mike<BR>
><BR>
> Ciao.<BR>
><BR>
> -Chris<BR>
><BR>
><BR>
> _______________________________________________<BR>
> ome-users mailing list<BR>
> ome-users@lists.openmicroscopy.org.uk<BR>
> <A HREF="http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users">http://lists.openmicroscopy.org.uk/mailman/listinfo/ome-users</A><BR>
<BR>
<BR>
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